| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0199 |
|---|
| Symbol | |
|---|
| ID | 5668624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 245060 |
|---|
| End bp | 245509 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641239128 |
|---|
| Product | aspartate alpha-decarboxylase |
|---|
| Protein accession | YP_001504572 |
|---|
| Protein GI | 158312064 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0853] Aspartate 1-decarboxylase |
|---|
| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.630189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.665559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCGGA CCATGCTCAA CTCGAAGATC CACCGGGCGA CGGTCACCCA GGCCGACCTG
CACTACGTGG GCTCGGTGAC GATCGACGCC GACCTGATGG CGGCCGCCGA CCTGCTGCCC
GGCGAGCAGG TGACGATCGT CGACATCAAC AACGGCGCCC GGCTGGAGAC CTACGCGATC
AGCGGCCCGG CCGGCAGCGG AATCATCGGG ATCAACGGGG CGGCCGCCCG GCTGGTCCAC
CCCGGCGACC TCGTCATCAT CATCTCCTAC GGGATCATGG ATGACGCCGA GGCACGCCGG
CACGTTCCGA AGGTCCTGTT CGTCGACGCG GAGAACCGGA TCGTCGGGCA GGGCGGTGAT
CCGGCGGCGG CGCTGCCGGG CGATCCGTCC AGCCTGCGGG GCGACGTCCT GGACCCGGCC
GGCGCTCGCG GCCTGGGCGG GGGGGCGTAG
|
|---|
| Protein sequence | MFRTMLNSKI HRATVTQADL HYVGSVTIDA DLMAAADLLP GEQVTIVDIN NGARLETYAI
SGPAGSGIIG INGAAARLVH PGDLVIIISY GIMDDAEARR HVPKVLFVDA ENRIVGQGGD
PAAALPGDPS SLRGDVLDPA GARGLGGGA
|
|---|
| |