| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0179 |
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| Symbol | |
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| ID | 5668604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 217922 |
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| End bp | 218809 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641239108 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001504552 |
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| Protein GI | 158312044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.183714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.508891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACT CCTCCGCGCC CTCGCCGCCC GCTCCCGCGG GTGCCCACGC CACCGCCGAG
CCTGCCCCCG CCCCGCGCAC CCTGGCCGGC GGCGCCGGCC TGGCCGCCCT GCTGACGACG
CCGGACAAGG CGCTCGTCGC CCTCGACTAC GACGGCACCC TCGCCCCGAT CGTCTCCCGG
CCCTCCGACG CGGTGCCCGC GCCCGGCGCG ATGGCCGCGC TGGGGCGGAT CTCCCGCCGC
GTCGGCACCG TCGCGATCAT CACCGGCCGG CCGGTGGACG CCGTCCTCGA GCTCACCGGG
GCGGAGCGGT TCACCGATCT CGGGCACCTG CTCGTCCTCG GCCAGTACGG GCTGCAGCGG
TGGGACGCCG AGACCCGGCA GACCACCGCC CCGGAACCAC TGCCCGGGGT GGAGGCGCTG
CGCTCGGCCC TGCCGGACGC ACTGCACGAC GCCCCGGCCG GGACGTCGGT CGAGGACAAG
CGGCACGCGC TGGTCGTCCA CGTGCGGCGG ACCGCCGACC CCGACGCCGC GCTGGCGGCG
CTCACCCCGG CGCTGACCAG GCTCGCCGAG GAGTACGGGC TCGAGGCGGC GCCGGGCAAG
CGGGTCCTGG AGCTGCGCCC GCCCGGTCAC GACAAGGGCC GTGCCCTGCG CGGGCTCGTC
GCCGAGCGGG CGGCCCGGTC CGTCCTCGTC GCCGGCGACG ACTACGGGGA TCTCCCCGCC
TTCGAGGCGG TCGACGAGCT GCGGGCCGGC GGCCTGGGCG CGATCACCGT GTGCAGCGAC
AGCCCGGAGG TGCCCGACGT GCTGCGCGAG CGGGCGGATC TGGTCGTCAG CGGCCCGACC
GGCATGGTCA CCCTGCTGGA GGTACTCGCC GACCGCCTCG GCGCCTGA
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| Protein sequence | MTDSSAPSPP APAGAHATAE PAPAPRTLAG GAGLAALLTT PDKALVALDY DGTLAPIVSR
PSDAVPAPGA MAALGRISRR VGTVAIITGR PVDAVLELTG AERFTDLGHL LVLGQYGLQR
WDAETRQTTA PEPLPGVEAL RSALPDALHD APAGTSVEDK RHALVVHVRR TADPDAALAA
LTPALTRLAE EYGLEAAPGK RVLELRPPGH DKGRALRGLV AERAARSVLV AGDDYGDLPA
FEAVDELRAG GLGAITVCSD SPEVPDVLRE RADLVVSGPT GMVTLLEVLA DRLGA
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