Gene Franean1_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0174 
Symbol 
ID5668599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp210311 
End bp210904 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content73% 
IMG OID641239103 
Producthypothetical protein 
Protein accessionYP_001504547 
Protein GI158312039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG TGGTTCAGGC TCCCACCCCA CTGCGATCCC ACCGCCCGAC CCTTACGCTG 
CCGGCCCCGC CGGTGTCCGT CGCGGATCTC GACGCGACGG CCCTGGAGGA CGCGCGCGTC
GAGGTGCTCG ACGGGCTGTG TGTCACCCGC CCCTGGCCGA CTCCGCTGCG GGCCCGGGTC
ACCGATCGGC TGCGGGCGCT GCTCGCCCAG GCGGCGACCT CGGGCGCACA GGTGTTCACC
GGCGTCCAGG TCGAGCTGTC GCCCCGGTGC CTGCTCGTGC CGGACGTGGC CGTGGTCGCG
GTCGGCGACC CCGACCGGCG GCGGATCACC GAGACGCCGT TCGGCGTGGT CGAGGTCGCC
GACGCCAGCA CCCGCCGCTA CGACCGCACG CTGAAGCTCG ACGTGTACCG GGAGCACGGG
GTTCCCGTGT GCTGGCTCGT TGACCCGGAT TCGGCGACGA TCGAGGCGTT CGAGCTGGTC
GGCCGCGACT ACGTGCCGGC CGGCATCGTG TGCGGCGACG AGGAGCTCAG CGTCCTGCGG
CCGTTCCCGG TGACGGTGAC CCCGGCCGAG CTCATCGACC CGCCCGACGA CTGA
 
Protein sequence
MSTVVQAPTP LRSHRPTLTL PAPPVSVADL DATALEDARV EVLDGLCVTR PWPTPLRARV 
TDRLRALLAQ AATSGAQVFT GVQVELSPRC LLVPDVAVVA VGDPDRRRIT ETPFGVVEVA
DASTRRYDRT LKLDVYREHG VPVCWLVDPD SATIEAFELV GRDYVPAGIV CGDEELSVLR
PFPVTVTPAE LIDPPDD