Gene Franean1_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0161 
Symbol 
ID5668586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp191566 
End bp192531 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content77% 
IMG OID641239090 
ProductSecC motif-containing protein 
Protein accessionYP_001504534 
Protein GI158312026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.560665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0707299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCGG TCGGCCCCCG CCAGCCTTGC CCGTGCGGCT CCGGCCGCCG GTACAAGGCC 
TGCCATGGGG AGCGCCGCCG GGCGGCCCCG GTGCTGCGCC CGTTCGCGGG CCGCGCGGAC
GAGCCGGACC TGGTCGCGCT GCGCGAGTTC GTCCCCAGCG CGACCGCGCC CCTGACCCTG
TCGGCGGAGC ACCTGACCGC CCATCCCGGC CACGCGGACC GGCGGATCAT CCTGGGCACG
CTGCTGCCGC AGGCCGCGCC CGCGGTGGTC CGTGACGACG GCGAGATCCT GTTGGCGATG
CAGACCCTCG TCGGCGGTCT CGACGCCTCG GCGGACGTCG CCGGCGCGCT GATCGCCGCG
CTCGAGGCGA AGCCCGGCAC GGTGGTGGAC GGCGGGCCGG CGTCCGCGCC GCAGGCGGTG
GAGCGGCTGC CCGGGGGCCT GGCGGACCTG CCCCGCCTCG CCGACCTGCT CGACCCGGCG
CCGCTCGAGA TCACCGTGCA TCCCGGGTTC ACCTGGTGGG TGCCGTCGTC GGAGGACGCC
GAGCCGAGCG CCGACGTCGT GGCGACCCTG GACCGCGCGA ACGCGACGGT CGTGCCGACG
ACCCGGTTGA CCTCCGTCCC GGCCGCCTAC TGGTGCAGCC CCGGCGACCG GCTGCACCTG
CGCTGGGTGC TGCCGCTCGA CGCCGACCGG ACGGAGGAGG CCCTCCTCGA CGCCCTCGCC
CGTCTCGCTG CCGCCGGCAG CCTCAGCGTC GGCGAGGGCT CGCGGTTCGT CGGGTCGTTC
CGCGCCGACG GTCTTGTGGT CCCGGTGTGG GATCTCGCGC CGGGCGCCGA CGCCGACTCC
TGCGAGAAGC CCGCGGCCCA GCTGTGGACG GCGCTGCGCG AGACCCTCGA CGATCAGCGG
GAACTGACTG CGCAGGAGCG GCGGGTCCGC GCCGGCGTGG TCGGGCGCAC GCTCACCCTC
CGATAG
 
Protein sequence
MPAVGPRQPC PCGSGRRYKA CHGERRRAAP VLRPFAGRAD EPDLVALREF VPSATAPLTL 
SAEHLTAHPG HADRRIILGT LLPQAAPAVV RDDGEILLAM QTLVGGLDAS ADVAGALIAA
LEAKPGTVVD GGPASAPQAV ERLPGGLADL PRLADLLDPA PLEITVHPGF TWWVPSSEDA
EPSADVVATL DRANATVVPT TRLTSVPAAY WCSPGDRLHL RWVLPLDADR TEEALLDALA
RLAAAGSLSV GEGSRFVGSF RADGLVVPVW DLAPGADADS CEKPAAQLWT ALRETLDDQR
ELTAQERRVR AGVVGRTLTL R