Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0161 |
Symbol | |
ID | 5668586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 191566 |
End bp | 192531 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641239090 |
Product | SecC motif-containing protein |
Protein accession | YP_001504534 |
Protein GI | 158312026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.560665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0707299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGCGG TCGGCCCCCG CCAGCCTTGC CCGTGCGGCT CCGGCCGCCG GTACAAGGCC TGCCATGGGG AGCGCCGCCG GGCGGCCCCG GTGCTGCGCC CGTTCGCGGG CCGCGCGGAC GAGCCGGACC TGGTCGCGCT GCGCGAGTTC GTCCCCAGCG CGACCGCGCC CCTGACCCTG TCGGCGGAGC ACCTGACCGC CCATCCCGGC CACGCGGACC GGCGGATCAT CCTGGGCACG CTGCTGCCGC AGGCCGCGCC CGCGGTGGTC CGTGACGACG GCGAGATCCT GTTGGCGATG CAGACCCTCG TCGGCGGTCT CGACGCCTCG GCGGACGTCG CCGGCGCGCT GATCGCCGCG CTCGAGGCGA AGCCCGGCAC GGTGGTGGAC GGCGGGCCGG CGTCCGCGCC GCAGGCGGTG GAGCGGCTGC CCGGGGGCCT GGCGGACCTG CCCCGCCTCG CCGACCTGCT CGACCCGGCG CCGCTCGAGA TCACCGTGCA TCCCGGGTTC ACCTGGTGGG TGCCGTCGTC GGAGGACGCC GAGCCGAGCG CCGACGTCGT GGCGACCCTG GACCGCGCGA ACGCGACGGT CGTGCCGACG ACCCGGTTGA CCTCCGTCCC GGCCGCCTAC TGGTGCAGCC CCGGCGACCG GCTGCACCTG CGCTGGGTGC TGCCGCTCGA CGCCGACCGG ACGGAGGAGG CCCTCCTCGA CGCCCTCGCC CGTCTCGCTG CCGCCGGCAG CCTCAGCGTC GGCGAGGGCT CGCGGTTCGT CGGGTCGTTC CGCGCCGACG GTCTTGTGGT CCCGGTGTGG GATCTCGCGC CGGGCGCCGA CGCCGACTCC TGCGAGAAGC CCGCGGCCCA GCTGTGGACG GCGCTGCGCG AGACCCTCGA CGATCAGCGG GAACTGACTG CGCAGGAGCG GCGGGTCCGC GCCGGCGTGG TCGGGCGCAC GCTCACCCTC CGATAG
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Protein sequence | MPAVGPRQPC PCGSGRRYKA CHGERRRAAP VLRPFAGRAD EPDLVALREF VPSATAPLTL SAEHLTAHPG HADRRIILGT LLPQAAPAVV RDDGEILLAM QTLVGGLDAS ADVAGALIAA LEAKPGTVVD GGPASAPQAV ERLPGGLADL PRLADLLDPA PLEITVHPGF TWWVPSSEDA EPSADVVATL DRANATVVPT TRLTSVPAAY WCSPGDRLHL RWVLPLDADR TEEALLDALA RLAAAGSLSV GEGSRFVGSF RADGLVVPVW DLAPGADADS CEKPAAQLWT ALRETLDDQR ELTAQERRVR AGVVGRTLTL R
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