| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0158 |
|---|
| Symbol | |
|---|
| ID | 5668583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 188268 |
|---|
| End bp | 188987 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239087 |
|---|
| Product | phosphoribosylformylglycinamidine synthase I |
|---|
| Protein accession | YP_001504531 |
|---|
| Protein GI | 158312023 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01737] phosphoribosylformylglycinamidine synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0650147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGAG CAGCTGCCGG CGGCGGCGGC GCGGCACGCG CCCCGCGAGT CGGCGTGGTG
ACCTTCCCGG GTTCGTTGGA CGACCGGGAC GCCGCGGCGG CCGTGCGCCT CGCCGGCGCC
GAGCCGGTGC CGCTCTGGCA CGGCGACGAC GAGCTGTCCG GGGTGGACGC GGTCGTCTTC
CCCGGCGGCT TCTCCTACGG CGACTATCTG CGGGCCGGGG CGATCGCCCG GTTCTCGCCG
GTCGTCGGCG CCGTCGTCGA GGCGGCCCGC GCGGGCCTGC CCGTCCTGGG GATCTGCAAC
GGGTTCCAGG TGCTGTGCGA GGCCGGGCTG CTGCCGGGCG CGCTGACCCG CAACGCGGGG
TTGCACTTCG TGTGCCGTGA CCAGCGGCTG CGGGTCGCGA CCACCAGCAC CGCCTGGACC
AGCGCCTACT CCCCCGGCGA GGAGATCGTC GTCCCGGTCA AGCACGGCGA GGGCCGCTAC
GTCGCCGACG CCGCGACCCT GGCCCAGCTC GCCGCGCAGG ACAGGGTGGT CGTCCGCTAC
GTGGGTGGCA ACCCGAACGG CTCGGTGGAC GACATCGCCG GAGTGTGCAG CGAGAACCGG
CGGGTGGTCG GCCTGATGCC ACATCCGGAG CACGCCGTCG AGGAGCTCAC CGGTCCGGGC
ACAGACGGCC TGCGGATGTT CACCTCGGTA CTCGGCGCGC TGCTCCGCCC CGCCGCCTAG
|
|---|
| Protein sequence | MVGAAAGGGG AARAPRVGVV TFPGSLDDRD AAAAVRLAGA EPVPLWHGDD ELSGVDAVVF
PGGFSYGDYL RAGAIARFSP VVGAVVEAAR AGLPVLGICN GFQVLCEAGL LPGALTRNAG
LHFVCRDQRL RVATTSTAWT SAYSPGEEIV VPVKHGEGRY VADAATLAQL AAQDRVVVRY
VGGNPNGSVD DIAGVCSENR RVVGLMPHPE HAVEELTGPG TDGLRMFTSV LGALLRPAA
|
|---|
| |