Gene Franean1_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0154 
Symbol 
ID5668579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp182932 
End bp184167 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content75% 
IMG OID641239083 
Producthypothetical protein 
Protein accessionYP_001504527 
Protein GI158312019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0138641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCAC TAGAAGTTCG TTCCGAGTCG GCTGGGGCCC GTGGGTCCCG GGGTTCGTCG 
GATGGTGCCG GCGTTCCCCC CGCTGGCACT GCGACGGATC ACAGTGAGGC CACGGCGCCG
TCCCCCGCGG ACGAGAAGCC ACGCCGGCCC GTGCGCCGGT CGTCGCGCCG CACGCGGGCG
GCAGCGGCCG AGCCCACCCC CCCGACGCCA CCTGACGCGT CAGCCTCCGC CACCGACGCA
TTGGGTGACC CGCCCGCCGG TGGGCCGGCT GATGCGTCCG TCGGCGTTCC GGCTGGTGCG
GTGTCGGGGC ACGAAAGTGC GGTGCCCGGG ACATCCGAGC CCGAAACCCC CGAGCCGGCG
GCGCGGGCGC GGATCGCACG GACGGGACGT CTGCTGCGGG AGCCCGTCCT CGACGCGGTG
TGCGCCGGCG CGGTGGACCT CGCCCGTGCC GCGGCCGAGG AGGAGGCCGG TTCGCCCGCA
GAGGTCGGCA GGCACCTCGG TGTCGAGGCC GAGGCGGAGC GGCTCGTCCT GCACCGGTTC
GAGTGCCTCT CCCGCGCCTA CGTCGGCTGG ACCTGGACCG TCGTCGTCGC GCGTGCGTCG
CGCATCCGGA AGGCGACCGT CAACGACGTC ATACTGACGC CGGGCGAGGG CGCGGTGCTC
GCCCCAGCCT GGGTGCCCTG GTCCGAGCGC CTGCGGCCGG GTGACGTCGG CGTGGGCGAC
CTGCTCCCGA CGGCCGTGGA CGACCCCCGG CTGGCGCTGC GGGCGAGTGA CGCGGAGGAG
ATCGACGACC CCGAGGCCTG GATGGGGCTC GGGATCGGCC GCCCCCGGAT GTTGTCGACC
TTCGGCCGGG AGGAAGCCGC CGAGCGCTGG TACGGCGGTG ACTCCGGGCC GGACGCGTCC
ATCGCCAAGG TCGCGCCGGC GGCCTGCCTG ACCTGCGGCT TCCATGTCCG GCTCGTCGGT
GCGCTCGGCC GCCTGTTCGG GGTGTGCGCG AACGAGCTCG CCCCGGATGA CGGCCGGGTC
ACAGCCGTCG ACCACGGCTG CGGAGCCCAT TCGGAGGCGC TGGTCGCGCC CTCGGCGCGT
CCGGAGCCGG TCCCCTTCGA CGAGGACCCC TCCGACCTGA CTCCGACCGA CATCGAGCTG
GTCGGGGTGG CCACGCACTC CCCGGGCTCA GTCCCGGACC AGCCCCCCGG CACCGCCGAC
GCCGACGCCG GCCCGGAGCC CTACGGCCAC TCCTGA
 
Protein sequence
MEALEVRSES AGARGSRGSS DGAGVPPAGT ATDHSEATAP SPADEKPRRP VRRSSRRTRA 
AAAEPTPPTP PDASASATDA LGDPPAGGPA DASVGVPAGA VSGHESAVPG TSEPETPEPA
ARARIARTGR LLREPVLDAV CAGAVDLARA AAEEEAGSPA EVGRHLGVEA EAERLVLHRF
ECLSRAYVGW TWTVVVARAS RIRKATVNDV ILTPGEGAVL APAWVPWSER LRPGDVGVGD
LLPTAVDDPR LALRASDAEE IDDPEAWMGL GIGRPRMLST FGREEAAERW YGGDSGPDAS
IAKVAPAACL TCGFHVRLVG ALGRLFGVCA NELAPDDGRV TAVDHGCGAH SEALVAPSAR
PEPVPFDEDP SDLTPTDIEL VGVATHSPGS VPDQPPGTAD ADAGPEPYGH S