| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0146 |
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| Symbol | |
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| ID | 5668571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 175504 |
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| End bp | 175902 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239075 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001504519 |
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| Protein GI | 158312011 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00475602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCACCG GCAAAGTCAA GTGGTTCGAC GTCGACAGGG GTTTCGGTTT TCTCAGCCGT
GATGACGGCG ACGCCGACGT CTTCGTCCAC AAGGCCGCTC TGCCGTCCGG TGTGGATCGC
CTCAAGCCCG GCGATCGGGT CGAGTTCGGC ATTGCCGCCG GCCGGAAGGG CGATCAGGCG
CTCTCGCTGC GCATTCTGAG TGCTCCTCCG TCCGTTGCCA AGGCCGCCGC GAACGCCTCA
CGGCGCAGCC CCGACGAGCT CCACAGCATG GTCGAAGACA TGATCAAGGT CCTCGACGAC
GTCCAACGCG ACCTGCGCCG CGGGCGCTAC CCCGACCGCA GGGCGGCCCA GAAGGTGGCC
AAGGTCGTCC ACGCGGTCGC CAACGAGCTC GAGCGCTGA
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| Protein sequence | MPTGKVKWFD VDRGFGFLSR DDGDADVFVH KAALPSGVDR LKPGDRVEFG IAAGRKGDQA
LSLRILSAPP SVAKAAANAS RRSPDELHSM VEDMIKVLDD VQRDLRRGRY PDRRAAQKVA
KVVHAVANEL ER
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