Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0144 |
Symbol | |
ID | 5668569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 173237 |
End bp | 175087 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239073 |
Product | serine/threonine protein kinase |
Protein accession | YP_001504517 |
Protein GI | 158312009 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.161088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0176124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCACA ACGGGGAACG CGTCGCTCCG GCGGCGCGCG GGCAGCCGGG TGGCATGGCA CCACCCGGTG AGGTCCTGCA CCCGCACGAA CCCCGGGCGA TCGGCCCGTA CCGCCTGCTG CGCCGCCTGG GCGCGGGCGG GATGGGCACG GTGTACCTCG CCGAGTCCGC CGGCCGCCGG GTCGCGGTGA AGGTCGTCCG GCCGGACCTG GCCGCCGACG AGGAATTCCG GCGGCGGTTC CGGCAGGAGG TCGACGCCGC CCGCCGGGTC GCGCCGTTCT GCACCGCCGA GGTGCTGGAC GCCGACCCCG ACGCCGCCGC CCCCTACCTG GTGACCGAGT TCATCGACGG CGTCCGGCTC GACCACGCGG TGGAGAACGG CCCGATCAGC GGCTCCACGC TGACCGGGCT CGCCGTCGGC GTGGCCACCG CGCTGACCGC GATCCACGGC TCCGGTCTCG TCCACCGTGA TCTCAAGCCG AGCAACGTGC TGCTGTCGAT GTCCGGCCCC CGGGTGATCG ACTTCGGCAT CGCGCAGGCG CTCGAGGGCG CCAAGGCGAA ACCCACCGCG TGGGGCTTCG GGTCCGCCGG CTGGATGGCC CCCGAGCAGG TGAACGGCCA GGCCATCGGC CCGGAGGCCG ACGTGTTCAC CTGGGGCATC CTGGTCGCCT ACGCGGGCAC CGGCCACCAC CCGTTCGGCA CCGGGACGGA CCTGGAGCTC AGCACCCGCA TCGTCGGCTC CCGCCCGGCC CTGGACGGCC TGCCGCACGA TCTGAAGGCG CTGGTCGCGG CCGCCCTCGC CAAGAACCCC GACGACCGCC CGAACGCCCG CGACCTGCTG CTGAGCCTGA TCTCGCTGCC GCCCACCCGA TCCGGCGACG GCCGGGACGA CGGCACCGGG CGGCCGAGCG CCAGCGCCGT CGGCCAGGCC GAGGAACTGC TGAACCTCAC CAGGGGCACG ACCCTGCCCG GCCTCGCGCC GACCCGGGTC GCCCCGGGGA CGTCCGGTGA GCGGGCCCCG GCCAGCCACG GCGGCCCCCC AGGTCACGGT GGCGGGGCGG GGCCGTCCGG TGTCGCTGTT CCGGCGCCGG CGGGCGCGCC GGCCTTCTCC GGGGCCCCCG GAGCGGCACG CGGGCCGGCT CCCGGCGGCG GCCCCGCGGG ATTCGGGCCC TCCGGCTTCC GCCCCGCCGG TGCTGGCGCG GCACCGCACC CACCCACGCA CGGGCCAAAC CCGCCGGTGC AGGGGCCGCG CCCGCCCGGT CAGGGCCCGT ACCCGCCCGT CCCCTCTGGG ACCAGCCAGC CTCGCTCCAC GTGGCACCGC GTGCTCCTGT TCGGCGCTGC CGCGCTCGCA GTCGTCCTGG CCGCCTGGCT GATCAGCTCG GTCGCCGGCG GCTCGGACGA TCCGGGAGCA GTCTCGGGAG CCGGCGACCG GCCCGCGGCG TCCCAGCAGC CGACGACTCC GCGCAGCGGG GGCCTGAACA CACCCGTCCG CGACGACCAG CTCGAGTTCA CCGCGAGCAA GATCAGCTGT GGCGCCGACC ACGTCGGCGA CGGGTTCCTG GCCCGCCGCC CGAGCGGCCA GTTCTGCCTG GTGGACATGA AGATCACCAA TGTGGGAACG GCCGAGCGTG TTCTGAGCAA CTCCAACCAG TACCTGCACA CCTCGGACGG CGGCCGCCAT GCCGCCGACT TCCTGGCCCG CTACTGGATC AACGACGGGA TCTGGGACAC GATCTCGCCC GGCGCCACGG TCACGGGCAC CTTCGTCTTC GACATCCCCG TGGACGCGGA GGCCGAGGAG CTCGAGCTGC ACGAGCGGCC GGAAAGCCCG GGCGTCACGA TCCAGCCGTA A
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Protein sequence | MDHNGERVAP AARGQPGGMA PPGEVLHPHE PRAIGPYRLL RRLGAGGMGT VYLAESAGRR VAVKVVRPDL AADEEFRRRF RQEVDAARRV APFCTAEVLD ADPDAAAPYL VTEFIDGVRL DHAVENGPIS GSTLTGLAVG VATALTAIHG SGLVHRDLKP SNVLLSMSGP RVIDFGIAQA LEGAKAKPTA WGFGSAGWMA PEQVNGQAIG PEADVFTWGI LVAYAGTGHH PFGTGTDLEL STRIVGSRPA LDGLPHDLKA LVAAALAKNP DDRPNARDLL LSLISLPPTR SGDGRDDGTG RPSASAVGQA EELLNLTRGT TLPGLAPTRV APGTSGERAP ASHGGPPGHG GGAGPSGVAV PAPAGAPAFS GAPGAARGPA PGGGPAGFGP SGFRPAGAGA APHPPTHGPN PPVQGPRPPG QGPYPPVPSG TSQPRSTWHR VLLFGAAALA VVLAAWLISS VAGGSDDPGA VSGAGDRPAA SQQPTTPRSG GLNTPVRDDQ LEFTASKISC GADHVGDGFL ARRPSGQFCL VDMKITNVGT AERVLSNSNQ YLHTSDGGRH AADFLARYWI NDGIWDTISP GATVTGTFVF DIPVDAEAEE LELHERPESP GVTIQP
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