Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0139 |
Symbol | |
ID | 5668564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 167892 |
End bp | 168431 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641239067 |
Product | FHA domain-containing protein |
Protein accession | YP_001504512 |
Protein GI | 158312004 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0141963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00495704 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCCCA CCGCGCCGAG CGAGCTCGTC CTCCTGCTGG TGAAGATCGG CTTCCTGGCG CTGCTCTGGG GGTTCGTCCT GGTCGCCGTC CGAGCTGTCC GCCTGGACAT GTTCGGGCCG ACCAAGCGCC AGCAGCGACG CCAGCCAGTA GTCGCGAGGG CACCGTCCCC CACCCCCGGG GGGCGTCCCG AACGTGTCAG ATCGCCACGC CAGAGCCCAC GCCCAGCCCC CGCGCCACCC ATCAACCCGG CTCCGAGCCG GCTCGTGGTC ACAAAAGGGC ATCTTGCCGG CACAACAATC CCACTAGGTC CCGAGGCAAT CACCATCGGA CGGGCACCGG ACTCGACTCT GGTCCTCGAG GATGACTTCG CGTCAGGACG GCATGCGAGA CTCGTTCCTC ACGACGGACA GTGGTTCGTC GAGGACCTCG GCTCGACCAA TGGCACATTC CTCAACCGCA CGAAGGTGAC GAGTCCCATG CCGGTACCTC TCGGCGCGCC GGTCAGGATC GGGAAGACGG TCCTGGAGCT TCACCGGTGA
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Protein sequence | MDPTAPSELV LLLVKIGFLA LLWGFVLVAV RAVRLDMFGP TKRQQRRQPV VARAPSPTPG GRPERVRSPR QSPRPAPAPP INPAPSRLVV TKGHLAGTTI PLGPEAITIG RAPDSTLVLE DDFASGRHAR LVPHDGQWFV EDLGSTNGTF LNRTKVTSPM PVPLGAPVRI GKTVLELHR
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