| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0130 |
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| Symbol | |
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| ID | 5668555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 155425 |
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| End bp | 157335 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239058 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001504503 |
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| Protein GI | 158311995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCACA CACCGACGCG GCGTGGCGGG GGCAGCCCGT TCCCGCCGAT CGCCGAGTAC
GGGTTCCTCT CCGACTGCGA GACGAACTGC CTCGTGGCGC CCAGCGGCAA CGTCGAGTGG
ATGTGCGTGC CACGCCCGGA CGCGCCGAGC GTGTTCGGTG CCGTCCTCGA TCGCTCGGCC
GGCGGGTTCC GCTTCGGACC GGACCGGACC TTCATTCCGG CCGGCCGGCG GTACCTGCCC
GGCACGAACG TCCTTGAGAC GACCTGGCAG ACGCCCACGG GCTGGCTGAT CGTCACCGAC
TGCCTGGTCG TGGGCCGCTG GCACCGGACG CACCGGCGCT CCAAGACGCA CCGGCGCACC
CCGGGCGACT GGGACGCCGA CCACGTGCTG CTCCGGCTGG CCCGCTGCGA GCACGGCGAC
GTCGACCTCA GCCTCGTCTG CGAGCCCAAC TTCGACTACG GCCGCAGCCC GGCGTCCTGG
CGGTACGAGG ATGAGGACTA CTCGACCGGG ATCATCACCC ACGACTTCCC GGCCGGCGAC
CCGGCAGCGG GCGTCGCGCT GCGGCTGCGC ACCGACCTGC GGCTCGGGTT CGACGGCCGC
CGCGCGCTGG CCCGGACGAC GTTGCGGGAG GGCGACACCG CGTTCGTGGC GATGACCTGG
CGGGCCGAGG ACCCGCTGCT GCCCGGTAAC TATCCGCAGG CCTGCGCCGC CGTCGACAGC
ACCACCGAGT TCTGGCGGCA GTGGCTTTCG CGTGGGCGGT TCCCCGACCA TCCGTGGCGC
CGGCACCTGC AGCGCAGCGC ACTGGCGCTC AAGGGCCTCA CCTACGCCCC GACCGGGGCG
CTGCTCGCCG CCGCGACCAC CTCGCTGCCG GAGACGCCGC AGGGCGAGCG CAACTGGGAC
TACCGCTACA GCTGGATCCG GGACTCCACG TTCGCCCTGT GGGGCCTGTA CACCCTCGGG
CTCGACTACG AGGCCAACGA CTTCTTCTCC TTCATCGCGG ACGTCGCCGA GCACGCCGAC
GACATCCAGG TGATGTACCG GGTCGGTGGC GAGCCGAAGA TCGACGAGGA GATTCTCGGG
CATCTGTCCG GCTATGACGG CGCCGTCCCG GTGCGGGTCG GTAACGAGGC GGCGAAGCAG
CGCCAGCATG ACGTTTGGGG GGCCGTTCTC GACTCGGTCT ACCTGCACAC CCGGTCGCGG
GACTATCTCT CGGAGCGGCT GTGGCCGGTG CTGGTCCGGC TGGTGGAGGC GGCGGCCGCG
CACTGGCGGG AGACGGACCG CGGCATGTGG GAGGTCCGGG GCGAGCCGCG GCATTTCACC
TCGTCGAAGA TGTTCTGCTG GGTCGCGCTG GACCGGGGGC GCCGCCTCGC GCAGATGCGC
GGTGACCTGC GAACCGCGGG CCGCTGGGAC GACATCGCCG ACGAGATCCA CGCCGACGTG
CTCGCGAACG GCGTCGACCA CCGCGGTGTC TTCACCCAGT ACTACGGCTC GACGTCGCTG
GACGCCTCGG TGCTGCTGAT GCCGCTGCTG GGTTTCCTGC CGTCGACGGA CGACCGGGTG
AAGGCGACCG TGCTCGCCAT CGCCGACGAG CTGACGGTGG ACGGCCTGGT GCTGCGCTAC
CGGACGGACG AGACCGATGA CGGGGTCGAG GGCGAGGAGG GCGCCTTCCT CATCTGCTCG
TTCTGGCTCG TCTCCGCTCT GGTGGAGATC GGTGAGCTCA CCCGGGCCCG GCAGCTGTGC
GAGCGGCTGC TGAGCCTGGC CAGCCCGCTG GACCTCTACG CCGAGGAGAT CGATCCGGCC
GACGGCCGGC ACCTGGGCAA CTTCCCGCAG GCCTTCACCC ACCTGGCGCT GATCAACGCG
GTCATGTACG TGATCCGGGC CGAGTCCGGG GAGTCCTTCA CCCGCTCCTA G
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| Protein sequence | MAHTPTRRGG GSPFPPIAEY GFLSDCETNC LVAPSGNVEW MCVPRPDAPS VFGAVLDRSA
GGFRFGPDRT FIPAGRRYLP GTNVLETTWQ TPTGWLIVTD CLVVGRWHRT HRRSKTHRRT
PGDWDADHVL LRLARCEHGD VDLSLVCEPN FDYGRSPASW RYEDEDYSTG IITHDFPAGD
PAAGVALRLR TDLRLGFDGR RALARTTLRE GDTAFVAMTW RAEDPLLPGN YPQACAAVDS
TTEFWRQWLS RGRFPDHPWR RHLQRSALAL KGLTYAPTGA LLAAATTSLP ETPQGERNWD
YRYSWIRDST FALWGLYTLG LDYEANDFFS FIADVAEHAD DIQVMYRVGG EPKIDEEILG
HLSGYDGAVP VRVGNEAAKQ RQHDVWGAVL DSVYLHTRSR DYLSERLWPV LVRLVEAAAA
HWRETDRGMW EVRGEPRHFT SSKMFCWVAL DRGRRLAQMR GDLRTAGRWD DIADEIHADV
LANGVDHRGV FTQYYGSTSL DASVLLMPLL GFLPSTDDRV KATVLAIADE LTVDGLVLRY
RTDETDDGVE GEEGAFLICS FWLVSALVEI GELTRARQLC ERLLSLASPL DLYAEEIDPA
DGRHLGNFPQ AFTHLALINA VMYVIRAESG ESFTRS
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