| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0117 |
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| Symbol | |
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| ID | 5668542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 138819 |
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| End bp | 140615 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239045 |
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| Product | peptidase C2 calpain |
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| Protein accession | YP_001504490 |
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| Protein GI | 158311982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGATCA AAGGGCAGTG GATCGAAGGG CAGTGGATCG AAGGGCAGTG GATCGAAGGG
GCTCCGGTCG CCGCCGCGGC GGCGGTGCTG CGCCGGGTCG CGGTGGAGAG CTCGTCGTTG
CTTGCGCCGG TGATCGTCCT GGACAACGAC GAGACCTGGC GGTCACCCTG GCAGCGCCGC
TGCCATGGCC GCATCGACGA GTGGACGTCC GCGCTCGCGG CCGGCGCCCG TGCGGCGCGG
GAGCAGGCGG TGCGTCTGGA GTTCCTTGCG GCTCGGGGCG CCTGGGGAGC CGTGACGCTC
GGGCCGGCGG CGGTGAGCGC CCCGCGCTCG CCCGTCTCTC ATCCGGCCGT CGTGGACGTT
GCCTTCTCTC CGGAGCGGCT CGCGGAGCTG GCCCGCCGGC TCCGGCGGGC CGCGGACGAC
GCGGCCCGGC TCGCGGCCGA GGTTAGGCGC GTCGCGCACG CCCTGCCCGG TGACATGGGT
GGTGCCCTGG TGGCGGAGGG GTGCTGTCGG GGCCTCGACC GGGTGGCGGC CGAGGCACCC
GACATGGCCG GCGCCATCGA CGGCAGACTG GCCTACGCCG CGTCTGGCGG GTCTGTCGCG
TCTGCCGGGT TCGGCGGGTC CGGCGGGTTT GCGACATCCG CTCCGGCCGT GGAGCGGGCG
CCGGGTCCCG AGATGCAGCA CGCCGCCCGG CTCACCGAAC CGCGGTCGGC GGGCGCGGAC
ACAGCGCGCA CCGTGGCCGA GCTGACCGCG TCGATCGGCG CGGACCCGTT CCGCCTCGAT
CCGCGTGAGC TGAGCGAGCT GTCCACCCGG CTGGGCCGGC TCGGCCCGGC CGAGCTGCGG
GCGGTCATCG GCGGGCTGCG GGGGCGCCCG CTGGAGGTGC TCGCCGCCGC GGTCCGTATC
GCGCCGACCC GGGTGGAGCT GCGCACGCTG GGCCTCCTGC CGGCCGTCTT CTCCCTTGGT
GACCTGCTCC TGCGCGGGGC GCCGGCGTCG ATGGTGGCCG AGATCGCGCG GCTGTTCCCC
GGCCTCGAAC CGCCCATGGG CGGGCGGTAC CGGCCGTGGG CGTACACCGC GGGGCATCCG
CCGTCCACCG GCGACCTGAC GATGCGCGAC CACGGTCGCG ATCCGGTCTG GGCGAGCGGT
GTCACCCCGT CGGACGTCGG CCAGGGCGCG GTGGGGGACT GCTACCTCCT GGCCGCGCTC
ATCGGTATCG CGCAGGCCGA TCCGGGGCTG CTGCGCCGCA ATCTGCGGGA GAACCCGAAC
GGGACGGTCA GCGTCACCGT CCACCTTCCT ACCGGCGCGG TCCCGGTCAC GGTCACCAGA
AGCCTGCCTG CCCGGGCGGG GGCCGGGCAG GAGATCGCCG CGGACGCGGA CAACGCCGCG
GGCGAGCCGG AGCTCTGGGC CGCGCTCTAC GAGAAGGCCT GTGCGCGGAT GGCTGGCAGC
TACGCGCGTC TTGAGGGCGG TGACCCCGCC ACCGCGATGG AGTACCTGAC CGGCACAGCC
GCGGTCCGCC GCTCGCCGTC CGCCGTGGGT GTCGACGAGC TCGCCGCCAG GCTGGCAGCC
GGTGGGGTGG TGACCGTCGT GACGCGTTCG GACCTGCCGC CGGGTTGCGG GCTGGTGCCC
AACCACGCCT ACGCGGTGCT GAAGGCGGAC GCGCGGACGG GGCAGGCCCT CCTCCGTAAC
CCGTGGGATC AGGCCGGCAC CGACGACCGG CTGGAGTGGC ACGACTGGGA CGGTCTGAAG
CCGGCGCTGG CGGGCGTCCA GTGGGCTTCG ACCGGCCGCG GTCCGCCGGC TCGATGA
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| Protein sequence | MSIKGQWIEG QWIEGQWIEG APVAAAAAVL RRVAVESSSL LAPVIVLDND ETWRSPWQRR
CHGRIDEWTS ALAAGARAAR EQAVRLEFLA ARGAWGAVTL GPAAVSAPRS PVSHPAVVDV
AFSPERLAEL ARRLRRAADD AARLAAEVRR VAHALPGDMG GALVAEGCCR GLDRVAAEAP
DMAGAIDGRL AYAASGGSVA SAGFGGSGGF ATSAPAVERA PGPEMQHAAR LTEPRSAGAD
TARTVAELTA SIGADPFRLD PRELSELSTR LGRLGPAELR AVIGGLRGRP LEVLAAAVRI
APTRVELRTL GLLPAVFSLG DLLLRGAPAS MVAEIARLFP GLEPPMGGRY RPWAYTAGHP
PSTGDLTMRD HGRDPVWASG VTPSDVGQGA VGDCYLLAAL IGIAQADPGL LRRNLRENPN
GTVSVTVHLP TGAVPVTVTR SLPARAGAGQ EIAADADNAA GEPELWAALY EKACARMAGS
YARLEGGDPA TAMEYLTGTA AVRRSPSAVG VDELAARLAA GGVVTVVTRS DLPPGCGLVP
NHAYAVLKAD ARTGQALLRN PWDQAGTDDR LEWHDWDGLK PALAGVQWAS TGRGPPAR
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