| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0109 |
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| Symbol | |
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| ID | 5668534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 127540 |
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| End bp | 128625 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239037 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_001504482 |
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| Protein GI | 158311974 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.880335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACGGAT CGTCATGGGA TCGCACGCGA AACACCGAAA GCACGGCCTG GGGCCGACCA
CCAGGACGGC GGCCACGGGC CGCGGCGGGC CACCCGGACA CCACACAGAC ACGAAGAGGA
ACACGTGACT CGTCCAGACC GACGGCAACC GGTACGTCGA GCGCAGACAG GGACCCGAGC
ACCGGCGGGG ACCCGAGCGC CGGCAGGGGT CCGAAGGCCG GCAGAGACCC GACTGCCGAC
GGAGTCCGGG CACGCGGCGA GCACGAACGG CCGGGGCTGA CCGTGGCCGT CACCCTCTAC
CCACCGGCCC GCAACCGCCC GGTCCGCAAC ACGTCCGGGA CGATGGTGGA GCCGACCCGC
GGGCTGATCC CCCACGTCCA GGTCGGCACC GGTTCGCTCT TCGGCTGGTT CGACAATCCG
GCCAGCCAGG TCAGCGCCCA CCTGTGGCTG TCGAAGGCAG GCGAGTTCGA GCAGTACGTC
CCGTTCGACC GCCGGGCCTG GGCGCAGGCC GCGGGCAACC CGTTCTGGAT CAGTGTCGAG
TGCGAGGGGT ACGACTCCGA GGACTACACG GCGATCCAGG TACAGCGCCT CGGCGAGCTC
TTCGCCTGGG GGATGCGCGA GTTCGGCTGG CGCCCCGAGA TCACGGACTC ACCCAACGGC
TACGGGCTCG GCACGCACCG CATGGGCGGC GCGGCGTGGG GTGGTCACTC GTGCCCGGGG
AACGTCCGCG CGAACCGCCG GGGCGACATC CTCGCGGCCG CGCTGGGGGC GTCCCCCGGG
GGCTCGCTCG CGGACCCGCG GCAGCGGTAC GCGGGGATGC CGACCTTGCG GGAGGGGATG
AGCGGGCCGG AGGTGGTCAC CCTGCAGAAC GCACTGAACA TCATTTTCGG CCACGAGGCG
CCGACGGGTG ACCCCTACCG CCTGGCGCCC GACGGGGCCT ACGGCGCGCG CACCACCGCC
CGGGTGGCCT CGCTTCAGCG GTACGCGACG CCGTGGTTCG GCCGCATACC CGAGGACGGG
GTCTGCGGCC CGAACACCTG GCGCAAGATC GGCTATGTCC TCACCGGGAT GAACCGCCAA
GTGTGA
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| Protein sequence | MYGSSWDRTR NTESTAWGRP PGRRPRAAAG HPDTTQTRRG TRDSSRPTAT GTSSADRDPS
TGGDPSAGRG PKAGRDPTAD GVRARGEHER PGLTVAVTLY PPARNRPVRN TSGTMVEPTR
GLIPHVQVGT GSLFGWFDNP ASQVSAHLWL SKAGEFEQYV PFDRRAWAQA AGNPFWISVE
CEGYDSEDYT AIQVQRLGEL FAWGMREFGW RPEITDSPNG YGLGTHRMGG AAWGGHSCPG
NVRANRRGDI LAAALGASPG GSLADPRQRY AGMPTLREGM SGPEVVTLQN ALNIIFGHEA
PTGDPYRLAP DGAYGARTTA RVASLQRYAT PWFGRIPEDG VCGPNTWRKI GYVLTGMNRQ
V
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