| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0108 |
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| Symbol | |
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| ID | 5668533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 126171 |
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| End bp | 127487 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641239036 |
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| Product | putative ABC transporter |
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| Protein accession | YP_001504481 |
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| Protein GI | 158311973 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.850247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG AATCCGATCA CGAACACGGC CGCGAGGCCA CGGCCGGCCC GGCCCCAGGC
ATCCCGGCCC AGACCGGTGC CGGGCCGGCG CCGGCGCCGG GTTCCGGTGG CCGGGGCGAC
TATCCGGCGC TGGGCTCCTG GGCGACCGTG CGGCTCGTCG CCGGTCGCGA GCTCGGCGTA
CGGCTGCGTT CCAAGGTCTT CCGGATCACC ACCGTCGCCC TCCTCGTCCT GCTCGTCGGC
GCCGCGGTCG TGATCGATCT GGTCGACGGC GGCGATTCGA CGGAGTCCGT CGGCGTGACG
GCGGCGGAAT CCGCGATCAC GGCGCCGCTC ACCGCCGCCG CCCGGAGCCT GGACGTCGGC
ATCACGACCC GCGAGGTGCC CGACGAGGCC ACCGGGTTGC GCCAGGTCGC CGACGGCGAT
CTGGACGCCC TGGTGACCGC GTCCCCGAAC GGCCTGCGCG TTGCCGTCAA GGAGGACCTG
AACGACGAGT GGCGCGCCGT GCTGGCTGTT GTGGCCCGCC AGCAGGTTCT CGACAACGAG
ATCAGCGTGC TCGGCGGCGA CCCGGCCCGG GTGAACGAGG CGGTCGCCGC CACGCGGGTC
GATGTCACCC AGCTCGACCC GGCGCCGGCC CACCAGGGCG AGCGGCTCGT CCTCGGGATC
GCCGCCGCGT TGCTGATCTA CATGGGCCTG ATGCTCTACG GGCCGGCCGT TTCCCAAGGG
GTGGTCGAGG AGAAGTCGAG CCGGGTGGTC GAGCTGCTGC TGTCGACGGT CCGCCCGTGG
ACGCTCATGG CCGGCAAGGT GTTGGGTATC GGGCTGGTAG CGCTGATCCA GATGATCGTG
CTGGCCGGCG GGGGCCTGGT CGCCGCGCTG GTCACCGGCG CGCTCTCGCT GCCCTCCGGC
GAGGCCACCG GGACGGTGAT CTGGTCGGTG GTCTGGTACG TCATCGGGTT CTTCCTCTAC
GCCCTCCCGT TCGCCGCGGT CGGGGCGATG GTCTCCCGGC AGGAGGACGT CGGGGGCATC
TCGAGCCCCA TCGTGCTGGC GATCGTGGTG CCCTGGGTGC TGGGGATCTC GATCGTGCCG
GGCGATCCCG ACAACGGCCT GATCGCGGTG CTGTCCCTGC TGCCGATCTT CGCGCCGGTG
CTGATGCCGA TGCGGATCGC TCTCGGGGTG GCGCCGGTGT GGCAGTTGGT CCTCTCGGTG
GTGCTCGCCT TGGCGCTGAT CGGCGTGCTC ATCCGGCTCA CCGGGCGGAT CTACCGCAAC
GCGGTGCTGC GGACCGGGGC GAGGGTCTCC TTCCGGGACG CCCTGCGCGA GGCCTGA
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| Protein sequence | MSPESDHEHG REATAGPAPG IPAQTGAGPA PAPGSGGRGD YPALGSWATV RLVAGRELGV
RLRSKVFRIT TVALLVLLVG AAVVIDLVDG GDSTESVGVT AAESAITAPL TAAARSLDVG
ITTREVPDEA TGLRQVADGD LDALVTASPN GLRVAVKEDL NDEWRAVLAV VARQQVLDNE
ISVLGGDPAR VNEAVAATRV DVTQLDPAPA HQGERLVLGI AAALLIYMGL MLYGPAVSQG
VVEEKSSRVV ELLLSTVRPW TLMAGKVLGI GLVALIQMIV LAGGGLVAAL VTGALSLPSG
EATGTVIWSV VWYVIGFFLY ALPFAAVGAM VSRQEDVGGI SSPIVLAIVV PWVLGISIVP
GDPDNGLIAV LSLLPIFAPV LMPMRIALGV APVWQLVLSV VLALALIGVL IRLTGRIYRN
AVLRTGARVS FRDALREA
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