Gene Franean1_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0097 
Symbol 
ID5668522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp114692 
End bp115714 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID641239025 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001504470 
Protein GI158311962 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.92974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACA TCGAGCGCCT CGCCACGTGG ATGGACGAGG CCGGACTCGC TGGCAAGGGC 
GAGCCGATCG AACACCGTTA CGTCTCCGGT GGCACCCAGA ACGAGATCTA CGAGATCCGC
CGCGGTGACC TGCACGGAGC GCTGCGCATC CCGCCGGCGG GGGCGCCCGC CAGCCGCGAC
GCCGGCATCC TGCGCGAGTG GCGCATCATC GAGGCCCTGG ACGGGACCGA CGTCCCGCAC
ACCGCGGCGC TCGGCATGTG CGAGGACGCC TCCGTCCTCG GCCGCTCCTT CTACATCATG
GGCTTCGTCG ACGGCTGGTC ACCGATGAGC CAGCGCGGTG TCTGGCCCGA GCCGTTCAAT
TCCGACCTCG AGCTCCGCAA GGGGCTGTCC TACCAGCTCG CCGAGGGCAT CGCGCTGCTG
TCGAAGGTCG ACTGGAAGGC CCGCGGCCTG GAGGGCCTCG GCCGCCCCGA CGACTTCCAC
GAGCGCCAGG TCGACCGCTG GACGGCCTTC CTGAACCGCA TCAAGAAGCG GGAGCTGCCC
GGCTACGACG TGGCTGCGCA GTGGCTGCGC ACACACCGGC CGATCGACTT CATCCCCGGC
CTCATGCACG GCGACTACCA GTTCGCGAAC GTGATGTTCC AGAACGGGGC GCCCGCGAAG
CTGGCCGCCA TCGTCGACTG GGAGATGGGC ACGGTCGGCG ACCCCAAGCT CGACCTGGCC
TGGATGCTGC AGAGCTGGCC CGAGGACACC AGCTCGACGG ACCTGATCGG CAAGAGCTAC
GCGGATCTCT ACGCGATGCC GACGAAGTCT CAGCTCCTCG CGCACTACGC GGAGGTGTCC
GGCCGGCAGG TCGATGACTA CGATTACTAC CTGATTCTGT GCAAGTTCAA GCTCGCCATC
GTCCTCGAGC AGGGCTTCCA GCGCGCGGGT GACGACGAGA AGCTGCTGTC GTTCGGCCCG
ATCGTGCTCG GCGCCATGCA GGAGGCCGCC GACCTCGCGG AGAGCACGGA CTACAAGCGA
TGA
 
Protein sequence
MIDIERLATW MDEAGLAGKG EPIEHRYVSG GTQNEIYEIR RGDLHGALRI PPAGAPASRD 
AGILREWRII EALDGTDVPH TAALGMCEDA SVLGRSFYIM GFVDGWSPMS QRGVWPEPFN
SDLELRKGLS YQLAEGIALL SKVDWKARGL EGLGRPDDFH ERQVDRWTAF LNRIKKRELP
GYDVAAQWLR THRPIDFIPG LMHGDYQFAN VMFQNGAPAK LAAIVDWEMG TVGDPKLDLA
WMLQSWPEDT SSTDLIGKSY ADLYAMPTKS QLLAHYAEVS GRQVDDYDYY LILCKFKLAI
VLEQGFQRAG DDEKLLSFGP IVLGAMQEAA DLAESTDYKR