Gene Franean1_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0096 
Symbol 
ID5668521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp113892 
End bp114695 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content74% 
IMG OID641239024 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001504469 
Protein GI158311961 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.839992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CTGACACCAG CACCGCGGAC ATCCTGCTGG AACGGGTCGG AGCGGTGCTG 
GTCATCCGCC TCAACCGGCC CGAGGCCCGC AACGCCCTGA CCCCCGCGCT GCTCAGCGCC
ATCGGCTCGG CGATCCTCAC CGCGGAGTCG GACCCCGACA TCCGGGTGGC CGTGCTGACC
GCCGCGGGCG AGAAGGCGTT CTGCGTCGGG ATGGACCTGA AGGCCTTCAC CTCGGGCGGG
GGCTTCTCCC AGATCGCGCC GGAGGACAAG GAGGGCCGGG CGGCCTTCGA CCGGCTGATG
GGCGGCGACG TCAAGGTCCC CCTCGTCGGC GCCGCGAACG GCACCGCGGT CGGCGGCGGC
TTCGAGCTGC TGCTCTCCTG TGACGTTGTC GTGGCCTCCT CGGCGGCGAA GTTCGGCCTG
CCCGAGGTCA AGCGGGGCCT GCTCGCGGCC GGCGGAGGCG CGGTCGCCAT CGCCAGCCGG
ATCCCCCTCG CCCTCGCGCT GGAGCTGACC CTCACCGGCG ACACCGTGGA CGCCGCGCGC
GCCCAGCAGC TCGGCCTGGT CAACGCGGTG GCCGAACCGG AGAAGGTGCT TGAGACGGCG
CTGGCGCTCG CCGAGCGCAT CGCCGCCAAC GGCCCGCTCG CCGTCGCCGC GACCAAGGAG
ATCGTCCGGG CCGCCGCGGC CGACCCCGCG CGCGGGCAGG AGCGCATGGC GCAGCTCTCG
CCGGCGGTGT TCAAGAGCGA GGACGCCAAG GAGGGCGCGA TGGCGTTCAT CCAGAAGCGC
ACGCCGCAGT GGAAGGGCCG GTGA
 
Protein sequence
MTDTDTSTAD ILLERVGAVL VIRLNRPEAR NALTPALLSA IGSAILTAES DPDIRVAVLT 
AAGEKAFCVG MDLKAFTSGG GFSQIAPEDK EGRAAFDRLM GGDVKVPLVG AANGTAVGGG
FELLLSCDVV VASSAAKFGL PEVKRGLLAA GGGAVAIASR IPLALALELT LTGDTVDAAR
AQQLGLVNAV AEPEKVLETA LALAERIAAN GPLAVAATKE IVRAAAADPA RGQERMAQLS
PAVFKSEDAK EGAMAFIQKR TPQWKGR