Gene Franean1_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0095 
Symbol 
ID5668520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp112875 
End bp113852 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content73% 
IMG OID641239023 
Productalcohol dehydrogenase 
Protein accessionYP_001504468 
Protein GI158311960 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.613109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCG CGGTCTGCCG CGAGTACGGC CAGCCGGAGG TCGTCCGCGT CGAGGAGTTC 
CCCACTCCCG AGCCGCAGCC CGACCAGGTC GGCGTGCGGG TGCGCGCGGC AGCGGTCAAC
TACTCCGACG TCCTGCTGGT CGCGGGTGAG TACCAGGTCA AGGTGCCGCC GCCGTTCGTC
CCCGGCAGCG AGTTCGCCGG TGTCGTCGAG ACGGTCGGCG CTGACGTGAC CGGCGTGGCC
GTCGGCGACC GCGTGTTCGG CACCGGCATG GTCGGTGCCT TCGGCGAGAT CGCGGTGGGG
CGGGCCGCCA GCCTCACCCG CACGCCGGAC GGCATCGCCG ACACCGTGGC CGCCGCCTTC
GGCGTGGCGC ACCGCACCTC GTACCACATG CTCCGGTCGG TGGCCCGGCT GCAGCCCGGC
GAGCAGCTCG TCGTGCTCGG TGCGGGTGGC GGGGTGGGCC TCGCCGCCGT CCAGCTCGGG
GCGGCGTTGG GCGCCACGGT GACGGCGGTG GCGTCGTCCG CGCGCAAACT CGAGGTGGCG
GCCACCAACG GCGCCACCCA CCTCATCGAC CACCGCGCGA ACGACCTCCG CAAGGCACTG
AAGGAAACCC TCCCGGACGG CGCCGACGTG GTCATCGACC CCGTCGGCGG TGACCTGGCC
GAGCCCGCGC TGCGTTCGCT GCGCTGGCGC GGCCGGTTCG TCACGGTGGG CTACGCCGCG
GGCTCGATCC CGCGGATCCC GCTCAACCTG GTGCTACTCA AGGGCATCCA GATCGGCGGG
ATGCAGCTGC GCGACCTGGG TACGCACGCG CCGGACGAGC TCCAGCGCAA CGAGCGGGAG
CTCATGGAAC TGTTCGCCGC GGGCAAGGCG GTGCCACACA TCGGCGCCAG CTTCACCTTC
GACGAGACAG CGGCGGCGCT GCGCTATGTG GCCGACGGCC ACGCCATCGG GAAGATCGTC
CTGGAGATCG CCCCGTAA
 
Protein sequence
MRAAVCREYG QPEVVRVEEF PTPEPQPDQV GVRVRAAAVN YSDVLLVAGE YQVKVPPPFV 
PGSEFAGVVE TVGADVTGVA VGDRVFGTGM VGAFGEIAVG RAASLTRTPD GIADTVAAAF
GVAHRTSYHM LRSVARLQPG EQLVVLGAGG GVGLAAVQLG AALGATVTAV ASSARKLEVA
ATNGATHLID HRANDLRKAL KETLPDGADV VIDPVGGDLA EPALRSLRWR GRFVTVGYAA
GSIPRIPLNL VLLKGIQIGG MQLRDLGTHA PDELQRNERE LMELFAAGKA VPHIGASFTF
DETAAALRYV ADGHAIGKIV LEIAP