Gene Franean1_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0093 
Symbol 
ID5668518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp110033 
End bp110944 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID641239021 
Productalpha/beta hydrolase fold 
Protein accessionYP_001504466 
Protein GI158311958 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCTA CGCAGGTCGA GACAGGGAGT GTGGAATCGA CCGACGGAAC GGTGATCAGT 
TATCGGACGA TTGGCCGGGG CCCCGGCCTC CTGCTCGTTC CGGGAGCCCT CGCGGTCGCG
GCGGACCTTG ATGGATTCGC GGCCGTGCTG GCGAGCGGGT TCACAGTCCA CACGATCGAG
AGACGGGGGC GCGGCGCCAG CGGCCCGCAG GGCGACGCCT ACACGGCGGC GAAGGAGCTC
GCCGACCTCG AGGCCGTCCG AGCGGCGACG CGAGCTCGAT TCGTCGTCGG GCACAGCTTC
GGCGGATTCC TGCTGTTGGA GGCCCTGCGA AACACCGGTG CCACTGCCGG TTCCGGTGCC
CCCGTCGGAG TCGGAGCCGG CGCGTTCGAC GGCGCCGCCG CATACGAACC CGGAGTTCTC
CTCGACGGCG TCGGGCCCGT GACGTTGGAA TGGGCGCGGC GCTGCCAGGA CGAACTCGAT
CGCGGCCGCC CACGGCAGGC GTTCATCACC TTCGTCCGTG GCGTTAACCC CGAGACGACG
GGACGGGTCC CTCGTGTCCT GCTCGGTCTC ATCCTGGCAT TCGCGATCAG ACCCGCCGAA
CGCCGCCGGA AGCACGCCCT GCTGGGCGGG ACGATCAGGG AGCATCAGGA AGCTGCGAGG
GTGGCGAACC AGCCCGACCG CTACCGCGCG ATCACGACTC CGACGCTGCT CATGGCCGGC
AAGGGCAGTG ACGACACCGC GGCCGGACGC GCGACCCGAC AGCTCGCCGG GATTCTGCCC
CGCGCCAGCC TCGTCACCTT CGGGGACCTC GACCATTTCG GGCCGGAGAG GGCGCCGGGG
CGTGTCGCCG CGGCGGTGGC CGACTTCTTC GCCGCCGTCG GCACGTCCGG CTCGGCGCGG
GCCGAGCGGT GA
 
Protein sequence
MVATQVETGS VESTDGTVIS YRTIGRGPGL LLVPGALAVA ADLDGFAAVL ASGFTVHTIE 
RRGRGASGPQ GDAYTAAKEL ADLEAVRAAT RARFVVGHSF GGFLLLEALR NTGATAGSGA
PVGVGAGAFD GAAAYEPGVL LDGVGPVTLE WARRCQDELD RGRPRQAFIT FVRGVNPETT
GRVPRVLLGL ILAFAIRPAE RRRKHALLGG TIREHQEAAR VANQPDRYRA ITTPTLLMAG
KGSDDTAAGR ATRQLAGILP RASLVTFGDL DHFGPERAPG RVAAAVADFF AAVGTSGSAR
AER