| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0023 |
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| Symbol | |
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| ID | 5668450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 28203 |
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| End bp | 29546 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641238952 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001504398 |
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| Protein GI | 158311890 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.222017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGA GCCTGTCCAC ACCGATGAGC TCACGGAGAA GTCGTGAACA GTGGCGAGGC
CAACGCGGTG GTGATCCCGG CCGCCGACGA CCACGATGCG CCCGCGTCCC CGCCGGCCGT
ATCCGCCGCA CCCTCGCACC CGCCATCGAG TTCGTCGGTG TCGCGAAGGA ATACAGCTCG
CGCGCCGGTC TGGTGGGTGC GGTCTCGCGG GTGGATCTCA GCATCGAGCA GGGCGAGTTC
TTCTCACTGC TCGGCCCGTC CGGCTGCGGC AAGACCACCA CCCTGAGGAT GATCGCCGGA
TTCGAGGAAC CGACCCGCGG GCGCATCCTG CTCCACGGCC GCGACGTCAC CGCCGTCCCG
CCCAATCGGC GCGATGTGAA CCTCGTCTTC CAGAGCTACG CGCTCTTCCC ACACCTGGAT
GTCGCCTCGA ACGTGGCCTT CGGGCTGCGG CGCCGCGGGG TCCGCGGCCA GGAGCTGCGC
AGGCGGGTCG GCGAGATACT CGAGCTCGTC GAGCTGTCCG GGCTCGCCGA CCGGCGGCCC
CGGGCGCTCT CCGGCGGCCA GCAGCAACGG GTCGCGCTCG CCAGGGCGCT GGTTAACCGG
CCGCGGGCCC TGCTGCTGGA CGAACCGCTC GGAGCCCTCG ACCTGAAACT GCGCCAGACG
ATGCAGATCG AGCTCAAGCG AATACAGCGC GAGGTCGGCA TCACGTTCGT GTACGTGACA
CACGACCAGA GCGAGGCGCT CACGATGTCG GACCGGATAG CGGTGATGAA CAGGGGCCGC
GTCGAGCAGC TCGCCGCCCC CCGGGAGATC TACGAAAGGC CTGGAACCCG GTTCGTGGCC
GGATTCATCG GCACGTCGAA CCTGCTGCGC CGATCGGTGC GGTCCGTCGA TCCGGCCGGC
GTGGACGGAA CTCCGGTGGC GGTTCTCGAC TCCGCCGCCG AAGAACGCCT GGTGGTTCCG
CTCCGGCCGG AGCTCGGCCG GCCAGCGACC GGATCCGAGT TGGAGATGAC CGTCCGGCCG
GAGAAAATCA CCCTGGGTGT GACGCGCCCC AACGGAACGT GCTGTGCGCT GCACGGTCGG
GTCACCGAGG TCGTCTATCT GGGCACGTAC ACGACATACA CGGTGTTGAC GCACGGTGGA
TCCGAGATCA CGGTTTTCTG GCAGAACAGC GCCGACGCGA CGAACATCGC AGACCGGGGC
GACGAGGTGT GGCTGTCGTG GCTGCCGACG CATTCCTTCG CCCTCGCACC GAGCGCCCAC
GCAAAGAGCA CCCCGCCGAG CGCCCTTGCA CCGAGCGGCT CCCTGCGGGA AGACCAGAAC
CACACGGAGG GACTCGCATC GTGA
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| Protein sequence | MPSSLSTPMS SRRSREQWRG QRGGDPGRRR PRCARVPAGR IRRTLAPAIE FVGVAKEYSS
RAGLVGAVSR VDLSIEQGEF FSLLGPSGCG KTTTLRMIAG FEEPTRGRIL LHGRDVTAVP
PNRRDVNLVF QSYALFPHLD VASNVAFGLR RRGVRGQELR RRVGEILELV ELSGLADRRP
RALSGGQQQR VALARALVNR PRALLLDEPL GALDLKLRQT MQIELKRIQR EVGITFVYVT
HDQSEALTMS DRIAVMNRGR VEQLAAPREI YERPGTRFVA GFIGTSNLLR RSVRSVDPAG
VDGTPVAVLD SAAEERLVVP LRPELGRPAT GSELEMTVRP EKITLGVTRP NGTCCALHGR
VTEVVYLGTY TTYTVLTHGG SEITVFWQNS ADATNIADRG DEVWLSWLPT HSFALAPSAH
AKSTPPSALA PSGSLREDQN HTEGLAS
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