Gene Franean1_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0018 
Symbol 
ID5668445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp24683 
End bp25021 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content68% 
IMG OID641238947 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001504393 
Protein GI158311885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.825328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG TCACCGCGAT CGTGCGGCCC CACCGCGTCG ACGACGTGCG GGCGGCCCTG 
ACAACCTATG GTGTGCACGG GATTACCGTC AGCCAGGTAA CCGGATTCGG GCTGGAAATG
TGGCGCACCC AGACCTACCG CGGCAACGCC TTCCATGACG AGTCAACCAG CAACATCCGA
CTGGAGCTGG TGGTGGCGGA CTCCGACGCG CCCGACGTGG TGAACGTGAT CCGACGAACG
GCGGCGTCGA CGTCCAGCGG GGCCGGAAAG ATCTGGGTGC TCCCGGTGGA GGGCCTGGCC
CGGATCCGGA CCGGCGAGCG GGGCGCCGAC GCGCTGTGA
 
Protein sequence
MKLVTAIVRP HRVDDVRAAL TTYGVHGITV SQVTGFGLEM WRTQTYRGNA FHDESTSNIR 
LELVVADSDA PDVVNVIRRT AASTSSGAGK IWVLPVEGLA RIRTGERGAD AL