| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0017 |
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| Symbol | |
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| ID | 5668444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 23241 |
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| End bp | 24332 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641238946 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001504392 |
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| Protein GI | 158311884 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.447324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGT TCGCGTCGAA CACCCTGGCC CTGGGGCCGG ACTTCATCAG TGCCGACAGT
CTGGCGAAGG CCGGCCTGGT GGTCGTCCTT CTGATCGTCT TCGCCGAGTC GGGGTTGCTG
GTCGGGTTCT TCCTGCCGGG TGACTCGCTG TTGTTCACCC TCGGTCTGCT GATCTCCCAG
GACGAGGTGT CCACGCCGCT GTGGCTCGCG TGTGCCCTGA TCGGTGTGGC CGCGGTCGCG
GGTGACCAGG TGGGCTACCT GTTCGGGCGG AAGGCGGGTC CGGCGCTGTT CCGGCGTCCG
GACTCGCGGC TGTTCAGGCA GGAGTATGTG GATCAGGCGC ACGAGTTCTT CGAGAAGCAT
GGTGGCCGCT CGATCGTGCT GGCGCGTTTC GTGCCGATCG TGCGTACCTT CACCCCGGTG
ATCGCCGGGG TGAGTCGGAT GAACTACCGG ACGTTCGTGG TCTACAACGT GATCGGTGGC
CTGCTGTGGG GCTGCGGGGT CACCGTTCTC GGCTCGCTGC TCGGGAAGAT CGATTTCATT
CGCCAGAACC TCGAGGCGAT GCTGATCCTC ATTGTGTTGA TCTCGGTGGT CCCGATCCTG
ATCGAGTACC TGCGCGCCCG CCGGACGAAG GCGACGACAG GGGACGCCGC CGGGTCCCCC
GACGCCACCA ACGCCGCGGG TACCGGGCCC GCCGGGCCCG CCGCCGGCCA TGGTCCGGCC
TGGGTGGACG GCCCGGTCCG GGAGCACGAC CGGGCCCCGG GCGCGGGGTT CGCGGGCGGC
TACGAGAGCA CGGGCGGCTA CCAGCCCGCT GGCGGGTATC AGGGCGGGTA CCAGCCTGTG
GACGTGTACC AGAGCGCGGA CGGGTACCGC AACGCGGACG GGTGGCAGCC GGAGAGCCGC
TACGACGACG GACGTTACGA CCAGCCCCGT GCGGGCACGG CGGGTGCGGC CGGGCACGGC
GGGCACGGCT ACGACACCGA GGGATTCCAG GATGCTCGGC CGCGGGAGGG CGAGGCCCCG
ATCCAGGAGG AGCGTGGCCC GGCCGGGCGC CGCGGCGGTG GCGGGCGGCA CTCCGCTCCT
CGGCACCGCT GA
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| Protein sequence | MTTFASNTLA LGPDFISADS LAKAGLVVVL LIVFAESGLL VGFFLPGDSL LFTLGLLISQ
DEVSTPLWLA CALIGVAAVA GDQVGYLFGR KAGPALFRRP DSRLFRQEYV DQAHEFFEKH
GGRSIVLARF VPIVRTFTPV IAGVSRMNYR TFVVYNVIGG LLWGCGVTVL GSLLGKIDFI
RQNLEAMLIL IVLISVVPIL IEYLRARRTK ATTGDAAGSP DATNAAGTGP AGPAAGHGPA
WVDGPVREHD RAPGAGFAGG YESTGGYQPA GGYQGGYQPV DVYQSADGYR NADGWQPESR
YDDGRYDQPR AGTAGAAGHG GHGYDTEGFQ DARPREGEAP IQEERGPAGR RGGGGRHSAP
RHR
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