Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0004 |
Symbol | |
ID | 5668431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5118 |
End bp | 6491 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641238932 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_001504379 |
Protein GI | 158311871 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.470302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATCTCA CCCACCTGTC CCTGACCGAC TTCCGCTCGT ACGCCCGGCT GGACCTCGTC CTCGAGCCAG GTGTCACGAC GTTCGTGGGT TCGAACGGTC AGGGCAAGAC GAACCTGATC GAAGCGATCG GATTCGTCGC CACGTTGGGT AGCCATCGTG TCGCGAACGA TGCTCCGCTC GTCCGCGAGG GGTGCGGGCA GGCTGTTGTT CGGGCCCGGA TCGTGCGCGG TGACCGGGCC GCGCTGGTCG AGATGCAGAT CGTGCCCGGG AAGGCGAACA GGGTCCGCCT GAACCGTGCC CCAGTGGCCC GGGCCCGCGA CGTGGCGGGA CTGCTCGCCA CGGTCCTCTT CGCCCCGGAG GACCTCGCGC TGGTGAAGGG CGACCCGGCC GAGCGGCGGC GGTTCCTCGA CGACCTGCTG GTCGCGCGGG CGCCGCGGAT GGCGGCGGTG CAGTCCGACT ACGACCGGGT GCTCAAGCAG CGCTCGGCGC TCCTGCGGTC GGCGGGAGCC GCCCGCCGTG CCGGTGGCCG GGGCGACCTG CGCACGCTCG ACGTCTGGGA CAGGCATCTC GCCGACCACG GCGCGGAGCT GCTCGCGGCC CGCCTGGCGC TGGTCGAGGA GTTGCGGCCG CGGGTCGAGA GCGCCTACGC CGCGGTCGCG GGCCAGGACG CGCCCACCGG CATCGAGTAC CGCTCGACCG TGACGCTCGA TTCGTCACCC GATCGGGCCT TGTCGCCAGG CCGGGCTGGC CTGGGCGAGC CGGACGGGGA CGCCGGCCGG AACGGAAACG GCGCCAGCCC GAATCACCCG AGTGGCTCGG GTGACCCCGC GAGCGGGAAC GGCGGTTCGG GCGACACCGA GGTTGGCGAC ACCGAGGCTG GCCGCACGGG TGATGGCGCG GGTGACGGTC GCACGGAAGC CGACCGCACA GAGGTTGGCC ATGTGGGAGG TGCCGTCGGC GGCACGGCGA CTCGGGCGGC GCTCGAAGAG GCGATCCTCG CCGGTCTCGC GGCGGTGCGC ACCCAGGAGA TCGAGCGCGG TGTGACGCTG GTCGGTCCAC ATCGTGACGA TCTGCTGTTG TCAGTGAACG GGCGGCCGGC GCGTGGCTAT GCCAGCCACG GCGAGTCCTG GTCGCTGGCG CTCGCGCTGC GGCTGGCCTC GTTCGAACTG CTCCGCGCGG ACGACCGGGA ACCGGTGCTG CTGCTCGACG ACGTGTTCGC GGAGCTGGAC ACCCGCCGGC GCGCGCGGCT CGCCGCCCTG GTCGCTGACG CCGAGCAGGT ACTCGTGACC GCGGCGGTCG ACGCGGATGT GCCGGCGGAG CTTGCCGGTG TGCGCTTCGA GGTGGTCTCC GGGGAGGTGT GCCGTGCCGG CTGA
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Protein sequence | MHLTHLSLTD FRSYARLDLV LEPGVTTFVG SNGQGKTNLI EAIGFVATLG SHRVANDAPL VREGCGQAVV RARIVRGDRA ALVEMQIVPG KANRVRLNRA PVARARDVAG LLATVLFAPE DLALVKGDPA ERRRFLDDLL VARAPRMAAV QSDYDRVLKQ RSALLRSAGA ARRAGGRGDL RTLDVWDRHL ADHGAELLAA RLALVEELRP RVESAYAAVA GQDAPTGIEY RSTVTLDSSP DRALSPGRAG LGEPDGDAGR NGNGASPNHP SGSGDPASGN GGSGDTEVGD TEAGRTGDGA GDGRTEADRT EVGHVGGAVG GTATRAALEE AILAGLAAVR TQEIERGVTL VGPHRDDLLL SVNGRPARGY ASHGESWSLA LALRLASFEL LRADDREPVL LLDDVFAELD TRRRARLAAL VADAEQVLVT AAVDADVPAE LAGVRFEVVS GEVCRAG
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