Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0001 |
Symbol | |
ID | 5675805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 71 |
End bp | 1654 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641238929 |
Product | chromosomal replication initiator protein DnaA |
Protein accession | YP_001504376 |
Protein GI | 158311868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.501183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC TCAGCGCCGA CTCCGTCGCC GGTCAGCCGT CCCGGGGAGC CGCGCCCACC TCGGAGCCGG ACCTGTCGGC GGTGTGGGAG CAGGCAGTGG CGGGCGTCGC GGACGGGACG CTCTCCGGCC AGCAGCGCGC GTGGCTGAGG CTGACCCGTC CACTCGGCCT CGTCCAGGAC ACCGCGCTGC TCGCCGCGCC GAACGAGTTC ACGAAGGACC TGCTCGACTC CCGGCTTCGA CCGTTCCTCT CCACCGCGCT GTCCACGGCC TACGGCCGGG AGATCCGGGT CGCGGTCACC GTCGAGCACA CGCCGGACCC GGAACCGATG ACCGGTCCCC TCACTCTCCC GGGCACCGAC CCCGGCGGCG GCCCCCGCTC GCTACTCGGA ACCGGCCACG AGCCCCGGCC GGGGGAGGAG CACCGAGGCG AGGACCGCCG GAACGAAGAT CGTCTCGACG GACGTCTCGA GGGTCGGGTC GACGGGGCGC CCCCCGGGCG GATGGCCCCG GGCCTGGGCC GCGACCCGTC GCCTCGCCCG TCCGAACCAG CCCGGCTCAA CCCCCGCTAC CTGTTCGAGA CCTTCGTCAT CGGTGACAGC AACCGCTTCC CACACGCCGC CGCCGTGGCG GTCGCGGAGG CCCCGGCAAA GGCCTACAAC CCGCTGTTCA TCTACGGTGA CTCCGGGCTG GGCAAGACTC ACCTGCTGCA CGCGATCGGC CACTACACGG TCAAGCTCTA CCCCGAGAGC AAGATCAAGT ATGTGAGCAT GGAGGAGTTC ACCAACGACT TCATCGCCTC GATCCGCGAC GACCGTCAGC TCGCGTTCCA GCGCCGCTAC CGGGACATCG ACGTCCTGTT GGTGGACGAC ATCCAGTTCC TCGAGAACAA GGAGCGGACG CAGGAGGAGT TCTTCCACAC CTTCAACGTC CTGCACGACA CCGAGAAGCA GATCGTCATC AGCTCGGACC GCTCGCCCAA GCAGCTCTCG GCCCTCGAGG ACCGCCTGCG CAGCCGATTC GAGTGGGGGC TGATCACCGA CGTCACGCCG CCTGACCTCG AGACGCGGAT CGCCATCCTC TCGAAGAAGG CCGCCACCGA GCGGCTGCCG GTCCCCCCGG ACGTCCTCGA GTACATCGCC ACGCACATCG AGCGCAACAT CCGCGAGCTC GAAGGGGCGC TCATCCGGGT CGCGGCCTTC GCCAGCCTGA ACAAGTCCCA CGTCGACCGC ACACTCGCCG AGATCGTGCT GCGCGACCTC ATCCCCGACG CGGCCAACCC GGAGATCACC GCCGCGGCCA TCATGAACGC CACCGCGGCG TACTTCGGTG TCTCCATGGA GGACCTGTGC GGGACGTCGC GCAGCCGGGT CCTGGTGACA GCCCGTCAGA TCGCGATGTA CCTCTGCCGT GAGCTCACCG ACCTGTCCCT CCCGAAGATC GGCCAGCACT TCGGCGGACG GGACCACACC ACCGTGATGC ACGCCGACCG GAAGATCCGC GGCCTGATGG CCGAACGCCG AGCGATCTAC AACCAGGTAA CCGAACTGAC CAACCGCATC CGCGCCCAAG CCCGACACGC CTGA
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Protein sequence | MTDLSADSVA GQPSRGAAPT SEPDLSAVWE QAVAGVADGT LSGQQRAWLR LTRPLGLVQD TALLAAPNEF TKDLLDSRLR PFLSTALSTA YGREIRVAVT VEHTPDPEPM TGPLTLPGTD PGGGPRSLLG TGHEPRPGEE HRGEDRRNED RLDGRLEGRV DGAPPGRMAP GLGRDPSPRP SEPARLNPRY LFETFVIGDS NRFPHAAAVA VAEAPAKAYN PLFIYGDSGL GKTHLLHAIG HYTVKLYPES KIKYVSMEEF TNDFIASIRD DRQLAFQRRY RDIDVLLVDD IQFLENKERT QEEFFHTFNV LHDTEKQIVI SSDRSPKQLS ALEDRLRSRF EWGLITDVTP PDLETRIAIL SKKAATERLP VPPDVLEYIA THIERNIREL EGALIRVAAF ASLNKSHVDR TLAEIVLRDL IPDAANPEIT AAAIMNATAA YFGVSMEDLC GTSRSRVLVT ARQIAMYLCR ELTDLSLPKI GQHFGGRDHT TVMHADRKIR GLMAERRAIY NQVTELTNRI RAQARHA
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