Gene Spea_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4253 
Symbol 
ID5664637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp5166414 
End bp5167382 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content45% 
IMG OID641238921 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001504098 
Protein GI157964064 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AAATAATTCT CGATTCTGAT CCCGGGATTG ACGATGTAAT GGCGATTCTG 
TTTGCTGAAG CGCACCCTGC AATTGAGCTG AAAGCTATTA CAACAGTCTA CGGTAACGCG
ACTATCGAGA ACGGTACTCG TAATGCTCTA TTTTTAAAAC AGAAGTATGG CTTTAATGCC
GATGTGGTTA AGGGGGCTGA TAAGCCTATC GTTCGCGACC CTGTTGGACC TACTATCGTG
GTTCATGGGG AAACTGGCCT AGGTGATGTA CATGCGCCTA CAGATCTAAC TCTGTCTGCG
GATCCTCGTC CTGCTTATCA ATATATTATC GATTCTGTTA AGGCTGAACC GGGTGAGATC
ACCTTGGTTG CCGTAGGTCC TTTAACTAAC TTGGCTTTAG CACTGGAAGC TGCACCTGAG
ATAGCTGGCT TAGTAAAAGA AGTTGTTGTA ATGGGCGGCG CGTTTGGTAT GAACGATCAC
CGTGGTAACG TGACTCCTTA TGCTGAGGCT AACATTCATG ATGATCCGCA TGCGGCAGAT
ATCGTTTTCA CTGCACCTTG GCCTGTGGTT GTTATTGGCT TAGACGTGAC AGAAGAGAGC
TTCTTTAGTA AAGACTATCT TGATCAGCTA AGAGATGACG CCGCTGAAGT TGGCCAGTTT
ATCTGGGACA TTAGCCGCTA TTATCTTAAG TTTTACTCCG AAAAAGTTGG CTTAGAAGGC
TGCCACGTAC ACGATCCGTC GGCAATTGCT TATGTTATCG ATCCTTCTCT GTTTACCTTA
CGTGAAGGGC CTATTCGCGT GGTAACAGAT GGTCCAGCCG AAGGATTAAC AATTCAGAAG
TTTGATGAGC GTAAGTACCA ACATGATGAC TGGGGAATGA ATCCGGCTCA AAAAGTTGGG
GTAGGGGTAA GAGATGAAGC GCTATTAAAG CTTTATCGTG AAACGATTAT TGAATACGGT
AATCGTTAA
 
Protein sequence
MTNKIILDSD PGIDDVMAIL FAEAHPAIEL KAITTVYGNA TIENGTRNAL FLKQKYGFNA 
DVVKGADKPI VRDPVGPTIV VHGETGLGDV HAPTDLTLSA DPRPAYQYII DSVKAEPGEI
TLVAVGPLTN LALALEAAPE IAGLVKEVVV MGGAFGMNDH RGNVTPYAEA NIHDDPHAAD
IVFTAPWPVV VIGLDVTEES FFSKDYLDQL RDDAAEVGQF IWDISRYYLK FYSEKVGLEG
CHVHDPSAIA YVIDPSLFTL REGPIRVVTD GPAEGLTIQK FDERKYQHDD WGMNPAQKVG
VGVRDEALLK LYRETIIEYG NR