Gene Spea_4251 details

Gene Information

• Locus tag: Spea_4251
• ID: 5664635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 5163240
• End bp: 5165129
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641238919
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001504096
• Protein GI: 157964062
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTTC ATGAACGGTT TGATGTAATT GTTGTTGGTG GTGGTCATGC TGGTACTGAA 
GCGGCTTTAG CTTCAGCTAG AATGGGCTCT AAAACACTTT TACTGACCCA TAACATAGAT 
ACTTTGGGAC AAATGTCCTG TAACCCTGCT ATCGGCGGCA TAGGTAAAGG ACACTTAGTC 
AAAGAAATTG ATGCACTAGG TGGAGCAATG GCTGTTGCTA CCGATTTTGC AGGTATCCAA 
TTTCGAACAT TGAATTCAAG CAAAGGGCCT GCCGTTCGCG CTACTCGTGC ACAAGCCGAT 
AGAGCGCTTT ATCGCCATAA GATCCAAGAG ATCTTACAGC ACCAAGCTAA CCTACGTATT 
TTTCAGCAAG CAGTAGACGA TCTTGTTGTT GAAAACGGAA AAGTTGTTGG TGTAGTTACA 
CAGATGGGCC TTGCCTTTGA AGCACCTGCG GTTGTCTTAA CTGCCGGTAC ATTCTTAGGT 
GGAAAAATCC ATATTGGACT CGAAAACTAC AGCGGTGGTC GAGCCGGTGA TCCACCTGCA 
ATCGCTTTAG CTCATCGATT AAGAGAGTTA CCAATTCGTG TTGGCCGTTT AAAAACTGGC 
ACACCACCAC GAATCGATGC TAATACCATC GACTTTTCAC AGATGACAGA GCAAAAAGGT 
GATGATCCAT TGCCAGTCAT GTCTTTCATC GGTGATGTAA ACGATCATCC TGAGCAGGTC 
TCTTGTCATA TCACGCACAC TAACGAGCGT ACCCACGACA TTATTCGTGG CGGATTAGAC 
CGAAGCCCAA TGTATTCAGG CATTATCGAA GGTATTGGTC CACGTTACTG CCCTTCTATC 
GAAGACAAAG TTAATCGATT TGCTGATAAA ACATCTCATC AAATCTTTAT CGAACCTGAA 
GGGTTAAATA CCACTGAAAT TTATCCAAAC GGTATATCAA CCAGTTTACC GTTTGATGTT 
CAGCTCAATT TGGTTCGTTC AATCAAGGGC ATGGAAAACG CTGAGATCAT GCGTCCAGGC 
TATGCGATTG AGTATGATTA TTTCGATCCT CGCGATCTTA AAAACTCACT AGAGACCAAA 
ACCATTGCAG GTTTATTCTT TGCTGGTCAG ATCAACGGCA CAACAGGTTA CGAAGAAGCG 
GGTGCACAAG GCCTATTAGC CGGCATGAAC GCCTCACTGC AAGTGCAAGG CAAAGAAGCT 
TGGTGTCCGC GTCGTGATCA AGCCTATCTA GGTGTTTTAG TTGATGACTT ATCGACTTTA 
GGCACTAAAG AACCGTACCG CATGTTCACT AGCCGCGCGG AATACCGTTT GCTGCTTCGC 
GAAGATAACG CCGATCTGCG TTTAACTGAG AAAGGTCGTG AACTTGGATT AGTCGATGAT 
AATCGTTGGG CACTGTTTAG CGAGAAGATG GAATCGATCG AAACTGAACT ACAGCGCTTA 
CGCGGTCAGT GGGTCCACCC AAATTCACCC TTGGTTGAAG CGTTGAACCC GCATCTGAAT 
ACACCGATCA CTCGTGAAGC TACGTTTGAA GATCTATTGC GTCGTCCAGA AATGGATTAC 
CCGAAACTGA TGTCTATTGA CGGTTTTGGT CCTTCGCTTG AAGATCAACG TGCTGCAGAG 
CAGGTTCAGA TCCAAGTTAA GTACTCTGGT TATATTCAGC GTCAGCAAGG CGAGATTGAT 
AAGGCGATTC GTCATGAGAC TACTCTGCTA CCGTTAGATT TGGATTACCA AGAAGTACCT 
GGTTTATCTA ACGAAGTAAT TGCCAAGATG AATGAACATA AACCTGAAAC CATTGGCCAA 
GCCTCTCGTA TTTCAGGTAT GACGCCAGCT GCTATTTCAA TTTTGCTGGT TCATCTTAAA 
AAACGTGGTT TATTACGTAA AAGCGCTTAG 

 

Protein sequence

MQFHERFDVI VVGGGHAGTE AALASARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDALGGAM AVATDFAGIQ FRTLNSSKGP AVRATRAQAD RALYRHKIQE ILQHQANLRI 
FQQAVDDLVV ENGKVVGVVT QMGLAFEAPA VVLTAGTFLG GKIHIGLENY SGGRAGDPPA 
IALAHRLREL PIRVGRLKTG TPPRIDANTI DFSQMTEQKG DDPLPVMSFI GDVNDHPEQV 
SCHITHTNER THDIIRGGLD RSPMYSGIIE GIGPRYCPSI EDKVNRFADK TSHQIFIEPE 
GLNTTEIYPN GISTSLPFDV QLNLVRSIKG MENAEIMRPG YAIEYDYFDP RDLKNSLETK 
TIAGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKEA WCPRRDQAYL GVLVDDLSTL 
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KGRELGLVDD NRWALFSEKM ESIETELQRL 
RGQWVHPNSP LVEALNPHLN TPITREATFE DLLRRPEMDY PKLMSIDGFG PSLEDQRAAE 
QVQIQVKYSG YIQRQQGEID KAIRHETTLL PLDLDYQEVP GLSNEVIAKM NEHKPETIGQ 
ASRISGMTPA AISILLVHLK KRGLLRKSA