| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4250 |
|---|
| Symbol | gidB |
|---|
| ID | 5664634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5162498 |
|---|
| End bp | 5163121 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641238918 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_001504095 |
|---|
| Protein GI | 157964061 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTATCTG CCCAATTAAA TGATTATTTG GCCGAAGTTG GCCTGACTGC TACCGAGCAG
CAAAAAAAGC AGCTTGTAGA CTTTGTTGGC ATGCTCAATA AGTGGAACAA GGCATTTAAC
TTAACCTCAG TGCGAGATCC TGAGCAGATG TTAATTCGCC ATATTATGGA CAGCTTAGTG
GTGTCTCCGC ACCTAAAAGG ATCGCGCTTT ATCGACGTAG GCACAGGACC TGGATTGCCA
GGGATCCCGC TAGCGATCTT AAATCCAGAT AAAGAATTCG TACTGCTCGA TAGCTTAGGT
AAGCGGATTC GCTTTCAGAA GCAGGTGCAG TTTGAGCTCG GTATCAACAA TATCTCTTCG
ATTGAAAGTC GTGTAGAGGC TTATCAACCT AAAGACTTGT TTGACGGTGT ATTAAGCCGC
GCATTTGCAT CTATTCAAGA TATGCTGCAT TGGTGCCATC ACTTACCAAA AGCAGATGGT
TGCTTCTATG CACTGAAAGG CCAACTAAGT GAAGAAGAGA TGTCACAGAT GCCTGCTGGC
TTTGTGGTGA CCGATACCAT AGAACTAAAA GTACCTAAAC TTGATGAGCA GCGCCATTTG
CTGCGAGTTA TCAAGCAAGA CTAA
|
|---|
| Protein sequence | MLSAQLNDYL AEVGLTATEQ QKKQLVDFVG MLNKWNKAFN LTSVRDPEQM LIRHIMDSLV
VSPHLKGSRF IDVGTGPGLP GIPLAILNPD KEFVLLDSLG KRIRFQKQVQ FELGINNISS
IESRVEAYQP KDLFDGVLSR AFASIQDMLH WCHHLPKADG CFYALKGQLS EEEMSQMPAG
FVVTDTIELK VPKLDEQRHL LRVIKQD
|
|---|
| |