Gene Spea_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4246 
Symbol 
ID5664630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp5159138 
End bp5159968 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content41% 
IMG OID641238914 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001504091 
Protein GI157964057 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000111234 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAA CTGGGGATGA CACGTTAACC GTAACGGCTT CCGACTATAT CCAGCATCAC 
CTGACTAATG CGAAAATGTG TTCCGCTGAT GGCGGGATTG CTTTTAACTA TGCATGTCAA
GATGCTGGAT TTTGGACTTG GCACATTGAC TCACTTTTGT TTTCAGTTGG TCTAGGGGTT
CTATTTTTGT GGTTATTCTA CAAAGTAGGA CAGAAGGCAA CAATTGGCGT TCCAGGCAAG
CTTCAATGTT TCGTTGAAAT GTGCGTGGAA GGTGTAGATA AAATTGTAAA AGACTCATTT
CATGGGAAAA ATGCAGTTAT CGCACCATTA GGTCTAACTA TTTTCGTCTG GGTTTTCCTG
ATGAACTTAA TGGACTTGAT CCCTGTTGAC TTTGTACCTG AGGCCGCCAA ACGATTCTTA
GGCGTACCTT ACCTAAAGAT TGTACCAACA ACTGACTTGA ACGTTACTTT AGGCTTAGCT
TTAAGTGTGT TCGCGTTAAT TGTTTTTTAC AGTATCAAGG TTAAAGGTAT TGGTGGGTTC
ACTAAAGAAC TGACTATGCA GCCTTTCAAT CATTGGGCAC TAATTCCAAT TAACTTTGTA
TTGGAAACAG TGACCTTGGT TGCGAAGCCG ATTTCATTAT CGCTTCGTCT GTTTGGTAAC
CTGTATGCAG GTGAGTTGAT CTTTATTCTG ATAGCACTGA TGCCTTGGTG GGCTCAGTTT
GCATTATCAG TGCCTTGGGC CATTTTCCAT ATTTTGGTAA TTGTGCTACA GGCGTTTATC
TTCATGATGC TTACGATTGT ATATCTAAGC ATGGCACATG AAGACCATTA A
 
Protein sequence
MATTGDDTLT VTASDYIQHH LTNAKMCSAD GGIAFNYACQ DAGFWTWHID SLLFSVGLGV 
LFLWLFYKVG QKATIGVPGK LQCFVEMCVE GVDKIVKDSF HGKNAVIAPL GLTIFVWVFL
MNLMDLIPVD FVPEAAKRFL GVPYLKIVPT TDLNVTLGLA LSVFALIVFY SIKVKGIGGF
TKELTMQPFN HWALIPINFV LETVTLVAKP ISLSLRLFGN LYAGELIFIL IALMPWWAQF
ALSVPWAIFH ILVIVLQAFI FMMLTIVYLS MAHEDH