Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4246 |
Symbol | |
ID | 5664630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5159138 |
End bp | 5159968 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641238914 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_001504091 |
Protein GI | 157964057 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000111234 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAA CTGGGGATGA CACGTTAACC GTAACGGCTT CCGACTATAT CCAGCATCAC CTGACTAATG CGAAAATGTG TTCCGCTGAT GGCGGGATTG CTTTTAACTA TGCATGTCAA GATGCTGGAT TTTGGACTTG GCACATTGAC TCACTTTTGT TTTCAGTTGG TCTAGGGGTT CTATTTTTGT GGTTATTCTA CAAAGTAGGA CAGAAGGCAA CAATTGGCGT TCCAGGCAAG CTTCAATGTT TCGTTGAAAT GTGCGTGGAA GGTGTAGATA AAATTGTAAA AGACTCATTT CATGGGAAAA ATGCAGTTAT CGCACCATTA GGTCTAACTA TTTTCGTCTG GGTTTTCCTG ATGAACTTAA TGGACTTGAT CCCTGTTGAC TTTGTACCTG AGGCCGCCAA ACGATTCTTA GGCGTACCTT ACCTAAAGAT TGTACCAACA ACTGACTTGA ACGTTACTTT AGGCTTAGCT TTAAGTGTGT TCGCGTTAAT TGTTTTTTAC AGTATCAAGG TTAAAGGTAT TGGTGGGTTC ACTAAAGAAC TGACTATGCA GCCTTTCAAT CATTGGGCAC TAATTCCAAT TAACTTTGTA TTGGAAACAG TGACCTTGGT TGCGAAGCCG ATTTCATTAT CGCTTCGTCT GTTTGGTAAC CTGTATGCAG GTGAGTTGAT CTTTATTCTG ATAGCACTGA TGCCTTGGTG GGCTCAGTTT GCATTATCAG TGCCTTGGGC CATTTTCCAT ATTTTGGTAA TTGTGCTACA GGCGTTTATC TTCATGATGC TTACGATTGT ATATCTAAGC ATGGCACATG AAGACCATTA A
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Protein sequence | MATTGDDTLT VTASDYIQHH LTNAKMCSAD GGIAFNYACQ DAGFWTWHID SLLFSVGLGV LFLWLFYKVG QKATIGVPGK LQCFVEMCVE GVDKIVKDSF HGKNAVIAPL GLTIFVWVFL MNLMDLIPVD FVPEAAKRFL GVPYLKIVPT TDLNVTLGLA LSVFALIVFY SIKVKGIGGF TKELTMQPFN HWALIPINFV LETVTLVAKP ISLSLRLFGN LYAGELIFIL IALMPWWAQF ALSVPWAIFH ILVIVLQAFI FMMLTIVYLS MAHEDH
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