| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4242 |
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| Symbol | |
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| ID | 5664626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5156243 |
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| End bp | 5157784 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238910 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001504087 |
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| Protein GI | 157964053 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAAC AGCGGATCGA GCAGTTCGAA
GTCGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTTGCAG TAAGTGACGG CATCATCCGC
ATCCACGGCC TAGCCGATGT AATGCAGGGT GAAATGATCG AGCTGCCTGG CAACCGTTTT
GCAATCGCGT TGAACTTAGA ACGTGATTCT GTCGGTGCCG TAGTAATGGG CCCTTATGCC
ACTTTGGCAG AAGGCGACAA AGTTAAAACA ACAGGCCGTA TTTTGGAAGT ACCTGTTGGC
CGTGGTCTAT TAGGCCGTGT AGTCAACACT CTAGGTGAAC CAATTGACGG TAAAGGACCT
ATCGATAGCG ATGGTTTCTC TCCTGTTGAA GTAATTGCAC CTGGTGTAAT TGAGCGTAAA
TCAGTCGATC AGCCAGTGCA AACTGGTTAT AAAGCCGTTG ACTCTATGAT CCCAATCGGT
CGTGGACAAC GTGAATTGAT CATTGGTGAC CGCCAGATCG GTAAAACCGC TCTAGCGATC
GACGCGATTA TCAACCAAAA AGATTCTGGC ATTAAGTGTG TATACGTTGC AGTAGGCCAA
AAGGCTTCTA CTATCGCTAA CGTGGTACGC AAGCTAGAAG AGCACGGCGC TTTGGCGAAC
ACCATTGTTG TTGTTGCTAC AGCTTCTGAA GCTGCTGCAC TACAATATTT GGCTCCATAC
TCTGGTTGTA CAATGGGTGA ATACTTCCGC GACCGCGGTG AAGACTCACT AATCGTATAT
GATGATTTGT CTAAGCAAGC AGTTGCTTAC CGTCAGATCT CATTGCTTCT TAAGCGTCCA
CCAGGACGTG AAGCATACCC AGGTGATGTA TTCTATCTTC ACTCTCGTCT GTTGGAACGT
GCTTCACGTG TTAACGCCGA GTATGTTGAG AAGTTCACTA AAGGTGAAGT TAAAGGCCAA
ACTGGTTCTT TGACTGCTCT ACCAATTATT GAAACTCAAG CTGGTGACGT TTCTGCATTC
GTACCGACTA ACGTAATTTC GATTACCGAT GGTCAGATCT TCCTTGAAAC AGACCTGTTT
AACTCTGGCT TACGTCCAGC TGTTAACCCT GGTATCTCTG TTTCTCGTGT TGGTGGTGCG
GCGCAGACTA AGATCATCAA GAAACTGTCT GGTGGTATCC GTACCGCTCT TGCACAGTAT
CGAGAGCTTG CAGCGTTCTC ACAGTTTGCA TCTGACTTAG ATGATGCAAC TCGTGCTCAG
CTTGAGCATG GTGAGCGTGT TACCGAACTA ATGAAGCAAA AGCAATATGC TCCAATGAGT
ATCGCTGATC AGTCTGTGTC TATTTTCGCA GCTGAAAAAG GTTACTTGAA GAGTGTTGCG
CTGAATAAAG TCGGTGATTT CGAAGCGTCT CTGCTCTCTT TCATGAACAG TGAACATGCT
GACCTAATGA AGACTATCAA CGATACTGGC GATTATAACG CTGATATCGA AGGTGAGTTG
AAGGCTAGCC TGGACAAGTT CGTAGAAACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSEARNEGT IVAVSDGIIR IHGLADVMQG EMIELPGNRF
AIALNLERDS VGAVVMGPYA TLAEGDKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP
IDSDGFSPVE VIAPGVIERK SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQIGKTALAI
DAIINQKDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY
SGCTMGEYFR DRGEDSLIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNAEYVE KFTKGEVKGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGERVTEL MKQKQYAPMS IADQSVSIFA AEKGYLKSVA LNKVGDFEAS LLSFMNSEHA
DLMKTINDTG DYNADIEGEL KASLDKFVET QTW
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