| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4236 |
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| Symbol | |
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| ID | 5664620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5148872 |
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| End bp | 5151004 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238904 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001504081 |
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| Protein GI | 157964047 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000695536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTCG GGACGTCATT TAAGTTTTCT CGCGTAGGGT TGGCAATCGT TGCTGCATTG
GCTTCATCAA CTGCTTTTGC TGAAGAAGCG ACAGCAGAAT CAAATGTTAA AGTTGATAGC
AATATCGAGC GTATTTCCGT TACCGGACGC AGTTTTAATG ATTATAACGC TGGCTCATCT
TCTGGAGCTA TGCGTGGTGA CATCGACATC TTAGACACCC CTCAATCAGT TACTGTTATT
CCTGACTTTG TGACTGATGA GCAGTTAGCT ACAAACCTTT CTGAAGTGCT AGTTAACGAC
TCGAGCGTAA CTGGCGGCTC TGAAAAGTGG AACCGCCAAG TATTTAATAT TCGTGGTTTC
GAACTTTCTT CTGGCTCAGG CTTCTTAATC AATGGTCAAC AGCAGTGGTC TCACTACGTG
CAGCCTATTG AAACACTACA ACAAGTTGAA GTGTTAAAAG GTCCTTCTTC TATGTTATAT
GGTCAGTCTG GTCCTGGCGG CTTGATCAAC ATGGTTACCA AGAAGCCAAC CTATGAAACG
ATGTTGGATA TTGGCTTCGA TACGGATGAG AATGGCTCGA CACGTTTCCA GTTGGACGCT
GGTGGTAGCT TAAACGAAGC AGAGACAATT CGTTACCGTA CAGTGCTAGT TAAGCAAGAT
ACGACTTATT GGAGAGAGTA CCAAGATGGT ACTAATCAAG AGCGTGACCG CTGGTTAGGT
TACCTAAACC TAGAGTTTGA TATTACTGAC GACTTAATGT TGTCACTTAA ATATGACCAT
ACTCAAGACA AGACGGGCAT CGACCGCGGT GGTTGGTTAG ATAGCAGCGG TGACCTGATT
GGTGGCCGTG ACATCATCTG GGATCAGCCT TGGGCGTTTA CCGACAACAC CATCTCTAAT
CTAGGTGCAG AGCTGACTTA TCACTTGTCT GATGACTGGA AAGTGAAAGC GGGTTATAAC
GATCAGCAGT TTAATCGTCA GCGTTTAGAC TCTTCTCCAT CACTAATTAG TGGTTCTGAC
GATCCATTTA CCGATGGCTA CTATGTCAGC CCATTTGACC GTTATGATGA CTGGCAGCAT
AAGACGGGCT ATGTTGATTT CACTGGTAAC TTCTATACTG GTGACATAGA GCATCAGCTG
CTTATCGGCG CTAATATGCT GGATTATTAC TATGGTCAGC TAAAAGACTC AGGTGAGAAG
AAACAAGTTG TGATGCCTGG TCAGCCAATG CCTAAACCTG ATCTAGATTA TAATCGTGAT
GAAACTTTGT ACGAGAGTGA GTACAAGCAC TACGGCTTCT ATGTTCAAGA TTTAGTTTCT
ATCACCGACG AATGGCAAGT GCTAGCTGGT GTACGTTATG ACGAACAGAA GAAAGAGGGG
GCGGGTAATA ACAGTTATGC GGTCTCTCCT AAGTTTGGTG TGATTTACTC ACCAGCCGAT
AATGGCAGTA TCTATGTTAA CTACTCTAAG AGCTTCACGC CGCAAGGGAT AGTGAACGAC
ATTGATGATG TTAATGATGG TAAGAACCTA GATCCTGAAT ACGGTGAACA GTATGAGATT
GGTACTAAGT GGGAGCTATT TGATGGCAGC TTACTATTAA CTGGTGCGGT ATTCGATATT
ACTGTTTCGA ACGTGACCGT AACAGAAGAG ATTGAAGGTA GCAGCCAAAC CATCACGACC
CAGTCTGGTG AACAGCGCCA TAAAGGTTTT GAAATGGGCG CTCAAGGTCA AGTTAGCGAT
AGCTGGTTTA TGACGGGTTC TATGATGTAC TTAGATGCTG AGTATCTTCG TCCTGAAACA
GATAGTTTAA ATGGTAAGAC TCCTGTTGAT GCGCCTGAGT GGTCAGCAAA CGTCTGGACT
CGTTATGAGA TGACAGATGA CTTAGCCCTT AACTTTGGTG CTATCTATGT GGGTGAGCGT
TTCGCTAATA CCAGTAACAG CATTAGCAAA GACGGCTATG TGCGTTTCGA TATGGGCGCT
GCATACACTA TGGACGTAAT GGGGAGCGAT GTTAGCATGC GTGTTAACGT GAAGAACCTA
TTCGATACAG ATTATCTAGC TGGTGGCACC AACACTGATG TTACTGTGGG TCAAGGTCGT
CACTTTAGCT TGGCACTAGA AGCTAAGTTC TAA
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| Protein sequence | MSVGTSFKFS RVGLAIVAAL ASSTAFAEEA TAESNVKVDS NIERISVTGR SFNDYNAGSS
SGAMRGDIDI LDTPQSVTVI PDFVTDEQLA TNLSEVLVND SSVTGGSEKW NRQVFNIRGF
ELSSGSGFLI NGQQQWSHYV QPIETLQQVE VLKGPSSMLY GQSGPGGLIN MVTKKPTYET
MLDIGFDTDE NGSTRFQLDA GGSLNEAETI RYRTVLVKQD TTYWREYQDG TNQERDRWLG
YLNLEFDITD DLMLSLKYDH TQDKTGIDRG GWLDSSGDLI GGRDIIWDQP WAFTDNTISN
LGAELTYHLS DDWKVKAGYN DQQFNRQRLD SSPSLISGSD DPFTDGYYVS PFDRYDDWQH
KTGYVDFTGN FYTGDIEHQL LIGANMLDYY YGQLKDSGEK KQVVMPGQPM PKPDLDYNRD
ETLYESEYKH YGFYVQDLVS ITDEWQVLAG VRYDEQKKEG AGNNSYAVSP KFGVIYSPAD
NGSIYVNYSK SFTPQGIVND IDDVNDGKNL DPEYGEQYEI GTKWELFDGS LLLTGAVFDI
TVSNVTVTEE IEGSSQTITT QSGEQRHKGF EMGAQGQVSD SWFMTGSMMY LDAEYLRPET
DSLNGKTPVD APEWSANVWT RYEMTDDLAL NFGAIYVGER FANTSNSISK DGYVRFDMGA
AYTMDVMGSD VSMRVNVKNL FDTDYLAGGT NTDVTVGQGR HFSLALEAKF
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