| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4230 |
|---|
| Symbol | |
|---|
| ID | 5664614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 5142449 |
|---|
| End bp | 5143300 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641238898 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_001504075 |
|---|
| Protein GI | 157964041 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAA TTTCACGAGA TAATCAAGAT AGATTAATGC TGGGCGCCAT TTGGGCAGCC
GCAGCAACCA CGCTGCTATT TTTACTCTGG GTGGTTTGGC ACATCCTAAG TAACGGCCTT
GACCACGTCA GTTGGGAGTT TATTACAGGC GCCTATACCC GTATCGGCGA AGCCTCTGGT
ATTTGGGCCA TGATTGTCTC GACCGTGTAC ATGGTCGGCC TATCACTCGC CTTTGCCGCA
CCTATTGGCA TCATGACGGC TATTTACTTA ACCGAGTATG CTGCGCCGGG TAGCAAAGTG
GTACAAGTGA TCCGTTTTTG CACCGAATCG TTAGCCGGTA TTCCGTCGAT TGTTTACGGC
CTATTTGGCA TGACCTTCTT CGTCACGACC TTAGGGCTAG GGTTTTCTAT CCTTTCAGGT
GCGCTAACAC TAGCTATGCT GATTTTGCCT GTGATTATCC GCACCACAGA GGAGGCGCTA
TTATCCGTAC CTATGAGCTA TCGCGAAGGT GGCTATGCAC TAGGTAGCTC TAAAATCTAC
ACCATCTGCC GCCTAGTTCT ACCGAGCGCT CTGCCGGGTA TCGTCACTTC GATTATTTTA
AGTACCGGCC GCGTGATAGG TGAATCTGCT CCGGTATTTT TAACTGCGGG TATGGTGACC
CAAATTCCAG AGTCGGTCTT AGAGTCTGGC CGCACCCTAA CTGTTCACCT TTATAAACTG
ACCCAAGAAC TCTTTACCCA GCACGAGTGG GATCAGGCCT ACGCTACCGC CACGGTATTG
ATTGTATTGG TACTTATTTT AAATCTGGCA ACCAAAGTGA TTGCCTCGCG TTTGAATAAA
TCATCGAAAT AA
|
|---|
| Protein sequence | MIQISRDNQD RLMLGAIWAA AATTLLFLLW VVWHILSNGL DHVSWEFITG AYTRIGEASG
IWAMIVSTVY MVGLSLAFAA PIGIMTAIYL TEYAAPGSKV VQVIRFCTES LAGIPSIVYG
LFGMTFFVTT LGLGFSILSG ALTLAMLILP VIIRTTEEAL LSVPMSYREG GYALGSSKIY
TICRLVLPSA LPGIVTSIIL STGRVIGESA PVFLTAGMVT QIPESVLESG RTLTVHLYKL
TQELFTQHEW DQAYATATVL IVLVLILNLA TKVIASRLNK SSK
|
|---|
| |