| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4209 |
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| Symbol | |
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| ID | 5664593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5116263 |
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| End bp | 5117177 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238873 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001504054 |
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| Protein GI | 157964020 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACACTT TTAATGCTAT TCCGATCTTT GTTGCTGTGG CAGATAGTGC CGGTTTTTCC
AGTGCCGCTC GTGTATTGGG TATTTCAAAG TCAGCAGTAA GCAAACGTAT CACGCAATTA
GAACAGCAGC TTGGGGCGCG TTTATTTTAT CGCTCTACCC GTAACCTTAG TCTGACTGAG
GCTGGAGAGC GTTACTATCA ATATGCATCT CAAGCCAATC GTGCCGCAAA GCAGGCTGAA
GATGCGGTGA GTGAGCTACA AGGTGAACCA AAAGGCTTGT TAAAAATTCA AGTGCCGATG
ACGATAGGGC AAATGCATTT GGCCTCGCTT ATCCCTGAGT TTATTGAGCG TTACCCTGAG
ATTCAGATTG ACCTTGTGAT GGATGATGAT GAAATCAACC TGATTGAACA GGGCTTTGAC
TTGGCGATTC GTGCCGATGA CTTGGTCGAT TCGAACTTAA TCGCACGTCT GTTAGTTCCT
TTGCATAGCG TTGTTTGCGT ATCTCCCTCG TTTTATCAAA AACACCGACA ACAGCTTACA
TCTCCCTCCC AGTTAGCCGA TCTAAACTGC ATACTTTATA GCTATTCCAA AAATGCCGAT
GTATGGCAAT TTAACGCTAA CAATGGTGAT GAATTCAAAG TCAAAGTAAC AGGAAACTAT
CGAGTTAATA ATAGCGCTGC ACTTAGAGAT GCGGTTATAG CTGGTATGGG GGCGGCACGG
CTCCCCACAT TTGTTGCTGG AGCTGCCATT CAGAGGGGGG ATCTGGTTGC TATATTTAAA
GACTATACAA TGCCGAGCAA AAAGCTCAAC GCTATCTACC CTGAGCGTCA CTATTTGCCT
GCAAAAGTAA GAGTGTTTTT AGATTATGTT ATTGAAAAAC TAGGGAACGG ATCTGCATAT
TGGGATGAAT TTTAG
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| Protein sequence | MDTFNAIPIF VAVADSAGFS SAARVLGISK SAVSKRITQL EQQLGARLFY RSTRNLSLTE
AGERYYQYAS QANRAAKQAE DAVSELQGEP KGLLKIQVPM TIGQMHLASL IPEFIERYPE
IQIDLVMDDD EINLIEQGFD LAIRADDLVD SNLIARLLVP LHSVVCVSPS FYQKHRQQLT
SPSQLADLNC ILYSYSKNAD VWQFNANNGD EFKVKVTGNY RVNNSAALRD AVIAGMGAAR
LPTFVAGAAI QRGDLVAIFK DYTMPSKKLN AIYPERHYLP AKVRVFLDYV IEKLGNGSAY
WDEF
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