| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4207 |
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| Symbol | |
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| ID | 5664591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5103907 |
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| End bp | 5106027 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238871 |
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| Product | ABC transporter related |
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| Protein accession | YP_001504052 |
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| Protein GI | 157964018 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATAC TCGAGCAAGA CGTCACCGCT AATGTGATTG AGTCGCTCTG TCAACGGCTC
GGTCTCGCCT ATAGCGAGCA GTTGCTGTTG CGGCAGATGG TTAGCCGAAA AGGGCTGTCG
GGGCATGACT TGCAGCAGGC TTGCGATAAC TTAGGGATAG AAGCGATAGA GCAGAAGCTC
TCTGTGTCCA AGATGGCGCT GCCAGCCATT GTTGTCTCTA AGCAAAATCA GCCAGGACTG
TTAATCATAG ATAAGAGTGG CGAGTTGCAA CTTATCGACG CTAAAGGCAC TGCCTCGCCA
ATAACGGCAA GCGATTTTAA GGCGCAATTT TATCAAGACA GCTGGCACGT TAAACGCAAA
ATGATTACCG ATGCCCGTAG TGAAGAGCAT CATCTTGAGG TTAAGCGCCA TTGGTTATTA
GCCGCCTTCG ACGAAGTTAA ACCTTTTTAC GGCAGCTTCT TGCTTGGCTC GTTAGCGATC
AATATTCTCG CGCTGGTTAC CCCCTTATTT ACCATGAATG TGTATGACCG TGTCGTGCCT
AATCAGGCCA TCGACACCTT GTGGGTGCTA GCAACGGGAG CCTGTATCGC CATTGTATTT
GATTGGTTAT TGAAGCAAGC GCGCACACGC TTAGCCGATG TAGCCGGTAA GCAGGTCGAT
ATTAAGATGT CGAATATCTT GTTTTCTAAG GTATTGGGCA TGCGTTTAGA GAGCCGGCCA
GCCTCCGCTG GCGCCTTTGC TAAGCAGCTG CAAGAGTTTG ATAGTATTCG TGACTTTATC
ACCTCGGCCA CCTTAGTCAC CGCAGTGGAT CTGCCCTTTA CTCTGTTGTT TTTAGCCCTG
ATCACTTGGT TAGGCGGTTA TATGGTGTTG GTGCCATTAG CCTGCATGTT GCTGCTGTTA
ATTATTAGCT TTGTGATGCA AAAGAAGCTG ATGGCGACCA TAGAACACAC CTCTCAGCTG
TCTACTCAGC GCCAAGCTCA CCTGATAGAA ACCCTCAACT TACTGGTTGA AACCAAACAG
AATAACGCTG AACCCAAGGC GCAGCGTATT TGGGATGACA CGGTCAACAG CTTGGCCGAT
TGGCAGAACG AGTCTCGAAT TGCCTCTAAC ACCCTCAATC ATAGCGTGAT GAATAGTCAG
CAGTTGGTCA CCATAGGCTT GATCATCTCT GGGGTGTATC AAATTCACGC GGGCAACTTG
AGTATGGGGG GCTTGATCGC CATCGTCATG CTAAGTGGCC GCGCGGCCAA TGCGATTAAT
CAGATCTCCA TGTTACTGCT TAAGTTTAAA CAGACTCAGT CGGCTATCAC GGCGGTCAGC
TCCATCTTGG AATTGCCCCA AGAGCAGGTT AAAGCCAGCC AACCTAGCAC TGCGGTGGGC
TTTAATGGTG CGCTGTCATT GCGTCATGCC AGCTTTAGTT ATCCCGACCA GCCTCTGCCA
GCGTTTACCG AGGTGAATCT AGAGATTAAA GCTGGAGAGA AGATAGGTTT GCTTGGGCCT
GCTGGTGCGG GTAAGTCGAG CCTGCTAGCT ATTATGGCTG GGCAGTATCA ACTTAGTAGT
GGTCAATTGT TTTATAACCG ACTAGAGGCC CGCCAGTGGG CAATTAGCGA TGTTAGAGAG
CAGGTGGGTT GGATGTCACA GCAGCCAGCA TTGGTGTACG GCACAGTGCT GGATAATCTG
TTATTTGGCT TAAAGAAGGT TGATGAGAAC TTATTAGCTG AGATCATAGT TAGCTCTGGG
ATAGATAAGT TAATGGATCG ACTGGGAAGC GGCTTAGATA GCCAAGTGGG TGAGTTTGGT
CGTCAGCTTT CCGGTGGCCA GCGTCAAGCT ATTGCCTTGG GAAGAGTGTT GCTGCGCCAG
CCAAAATTAC TGCTACTGGA TGAACCAACT AGCGCCATGG ATGAGCGCTC CGAGAATCAA
ATTATCGCCT GCCTATCACA GGTCAAAAAT AGCAGCCTAG TTATCGCCTC CCACAACCCT
AAATTGCTGA GTTTATGTGA CCGTATTTTA GTGGTCGATA AGGGACGCAT CATTCAAGAG
CAAACCCCTG ATGAGATGCG TCAACGTGGC AAGAGTCGTA TCAAAGCGGT GAATGTGCGT
CAGAAAGGAG AGCTGAAATG A
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| Protein sequence | MMILEQDVTA NVIESLCQRL GLAYSEQLLL RQMVSRKGLS GHDLQQACDN LGIEAIEQKL
SVSKMALPAI VVSKQNQPGL LIIDKSGELQ LIDAKGTASP ITASDFKAQF YQDSWHVKRK
MITDARSEEH HLEVKRHWLL AAFDEVKPFY GSFLLGSLAI NILALVTPLF TMNVYDRVVP
NQAIDTLWVL ATGACIAIVF DWLLKQARTR LADVAGKQVD IKMSNILFSK VLGMRLESRP
ASAGAFAKQL QEFDSIRDFI TSATLVTAVD LPFTLLFLAL ITWLGGYMVL VPLACMLLLL
IISFVMQKKL MATIEHTSQL STQRQAHLIE TLNLLVETKQ NNAEPKAQRI WDDTVNSLAD
WQNESRIASN TLNHSVMNSQ QLVTIGLIIS GVYQIHAGNL SMGGLIAIVM LSGRAANAIN
QISMLLLKFK QTQSAITAVS SILELPQEQV KASQPSTAVG FNGALSLRHA SFSYPDQPLP
AFTEVNLEIK AGEKIGLLGP AGAGKSSLLA IMAGQYQLSS GQLFYNRLEA RQWAISDVRE
QVGWMSQQPA LVYGTVLDNL LFGLKKVDEN LLAEIIVSSG IDKLMDRLGS GLDSQVGEFG
RQLSGGQRQA IALGRVLLRQ PKLLLLDEPT SAMDERSENQ IIACLSQVKN SSLVIASHNP
KLLSLCDRIL VVDKGRIIQE QTPDEMRQRG KSRIKAVNVR QKGELK
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