Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4192 |
Symbol | |
ID | 5664576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 5087376 |
End bp | 5088521 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238856 |
Product | ABC-2 type transporter |
Protein accession | YP_001504037 |
Protein GI | 157964003 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.148286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATA AAATAATTTC TATGATCCGC AAGGAGCTGA TCGACGCCGC TCGTGATAAA CGCTCTGTGA TGGCGGGCCT CTACTACGCT ATGGGCGCCC CGCTGCTGAT GTGTGGCATG TTCTTTCTGC TGATCGGTCA GCTAACCAGC CCTGAAGATC TCAATATTAA AATCGATAAT GCACAGGGCG CACCCGATCT GGTGAAGTTC CTGTCTAGTC GTGGCATTTC TCAGGGTGAT GACACTGAAA AAGCAGACAC TAAAGACATT CAACTCATCA TCAGCCAAGA CTATGCCGCC AATATGGCCA AGGGTCTTAG CGCCGAAGTG ACGCTGATTG CCGATGCCTC CGATGAGAAA CTGCAGATCT CAATTCGACG TCTCAAAAAT AGTCTGCTGG AATACAGCTC AGAGATGGGC AGCCTACGCC TAATTGCTCG TGGTATCGAC CCAAGAGTGA TGCAGCCGTT AAAGCTCAAT ATTGAAGATG AAGCCACTCC AGATTCTAAG GCCGGCATGA TCTTAGGCCT AGCAACCATG ACCATGATCT ATGCGGTATT TATCTCTGGT ATGAACCTGG CCATCGACAC CAGCGCCGGC GAGCGCGAGC GTAACTCGTT AGCGCTACTA CTGAGCCACC CGGTTTCTAC TTGGGAAATC GTTATCGCTA AAGTAACCGC GGTAACTATC TTTGCCATGG TGGGGCTCGT GCTGACGCTA ATCGTGTCTA AATTTGCCTA TGCCTTTGTG CCTTGGCAGG AGCTTGGCTT TGCCGTGAGC GTTAATACCA GCTTTATGCT GATGATGCTT ATTGTCGGTG CGCCAGTAGC GATTATGGCG GCGTGCTTGC AGCTGTTTGT CTCCTTTATG GCTAAGAGCT TTAAGGAAGC CCAGTCTTAC ATCACGATCG TGTTAATGGT GCCTATGATG TTAGCCATGG CCGCCAGCTA CAACATCGCG CCGGAGACCA TTCAGTGGTT ACCTGTATCG GGCCAACTTC AGGCTCTTAT TGAGTTTATT AAGGGCCGTG AGCTGCCAAT GTTGCAACTT GCCGTTTCAT CGGCGTCGAC GCTAGCGATT GCCTTAGGAC TTGCTATCGG TATGCAAAAA TCGCTCAAGA GCGAGAAGAT CGTCTTTGGT TTATAA
|
Protein sequence | MSNKIISMIR KELIDAARDK RSVMAGLYYA MGAPLLMCGM FFLLIGQLTS PEDLNIKIDN AQGAPDLVKF LSSRGISQGD DTEKADTKDI QLIISQDYAA NMAKGLSAEV TLIADASDEK LQISIRRLKN SLLEYSSEMG SLRLIARGID PRVMQPLKLN IEDEATPDSK AGMILGLATM TMIYAVFISG MNLAIDTSAG ERERNSLALL LSHPVSTWEI VIAKVTAVTI FAMVGLVLTL IVSKFAYAFV PWQELGFAVS VNTSFMLMML IVGAPVAIMA ACLQLFVSFM AKSFKEAQSY ITIVLMVPMM LAMAASYNIA PETIQWLPVS GQLQALIEFI KGRELPMLQL AVSSASTLAI ALGLAIGMQK SLKSEKIVFG L
|
| |