| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4186 |
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| Symbol | |
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| ID | 5664570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5080306 |
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| End bp | 5082102 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238850 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001504031 |
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| Protein GI | 157963997 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCG AGCAATATCA CGTAGTACGA TTAATACAGC AACAGAGCCA AGCACTTGGC
GATGCTATTG CGCTCGAAGG ATTCGAAACT GCAGCGCCTT GGCATCAGGT GAGCTGGAGT
CAATTCGATA CCATCACCTC TAAAATTGCA CGAGTGTTGA TTCAATTTGG TATTGAGTCA
CAAGACCGCG CAATTATTTT GTCACAGAAC TGTCCGCAGT GGACTTGTGC CGATTTAGGC
CTATTAAAGG CTAAAGCGAT AGTTGTGCCT ATCTATCCGA CTAGCACAAT TGAACAAGCT
GCTTACATAG TTAACGATGC CGAAGCGAAA TTGATTTTTG CTGGCGACGC TGCTCAGTAT
GCCATGGCGT GTGATTTGGT TGCCCAGTGT GACAGCCTGA CTCGCGTAGT AGTTTTCGAC
AAATCTGTTG AACTGCAAGA TCTACAAAAT CATTTTTATC TAGATGATCT ATTGGAGCGC
GAAATTGATA GCGCTGCAGA TGCTGAACTT GAAAAGCGTT TGAACGATAA GAATTTAGAT
GATCTACTGA CGCTAATTTA CACCTCAGGT ACAACGGGTG ATCCAAAGGG CGTAATGCTC
GATTACCGCA ACATTGCTTC TATGGTGCGT CAGCACGACA AATTCTTACC GTTCACACCG
GGCGATGTGT CATTGGCATT CTTGCCATTG AGCCACGTAT TTGAACGCGG TTGGAGTTTC
TACGTTTTAT GTCGCGGTGG TCATAACGTT TACCTGTCTA ACCCAATGGC AGTGAAAGAG
GCGATTGTGC AAGTTCGCCC GCATACTCTA TGTGTGGTGC CACGCTTCTT AGAGAAAGTG
TATAGCGCCG TGCAAGATAA GGTGATTAAA GCACCAGAGT TGAGACAGAA GATGTTCACT
TGGGCCATGT CTGTTGGTCA TAAACAGTCT GAAGTCGGTC AAGGTCGTCA TAAAGCATCA
TTGGGCTTAA ACCTACAGTG GAAACTGGCA GATAAGCTGG TTTTCAGTAA ATTAAAGCAG
GTTTTAGGTG GCCGTCTTAA GTTTATGCCT TGTGGCGGTG CAGCTTTAGA TCCAAACGTC
AGTGCCTTCT TCCAAAGCAT CGATGTCCCA GTGCTATGTG GTTACGGTAT GACTGAAACC
ACTGCAACAA CGACCTGTAA TACCTTAGGT AACCGTGTGC CAGGCTCTAA CGGCCAAGTC
ATACCAGAAG CCGAGATTAA GCTGGGTAAA GACAACGAAA TTCTAGTACG CGGTGATACC
GTAATGCGTG GCTATTTCAA TCGCCCTGAA GAAACTGCCG AAGCATTCGA AGATGGTTGG
TTGAAGACGG GTGATGCGGG TCGTATCGAC GAAAACGGCA ACCTGTTTAT TACAGACCGT
ATTAAAGAGC TGATGAAAAC CTCAAATGGT AAGTATATCG CGCCGCAACG TGTCGAAGGT
AAGGTAGGTT GCTGCCCATT CATAGAGCAG GTGGCGATTG TTGCCGATGC GCGTAACTAT
GTGACAGCCT TGATTGTACC TGCATTTGAG TCATTAGAAG CTTGGGCAAA AGAGAAGGGC
GTACATTACG AGTCGCAGCT GGATCTATTG CGTCATACTC ACGTAGTTGA ACACTTTGAG
CAACGCCTTA AGACTCTGCA AAGCGAGCTA GCTGGCTTTG AAAAGATTAA GAAGTTTACC
TTGTTGCCAG ATGCTTTCTC TATGGAAGCA GGCCTTATTA CCCCAACGAT GAAGTTGCGT
CGTAAGGTGA TTTACAACAA GTACGCTCGT GAAATCGATA AGATGTATAG CCGCTAA
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| Protein sequence | MSLEQYHVVR LIQQQSQALG DAIALEGFET AAPWHQVSWS QFDTITSKIA RVLIQFGIES
QDRAIILSQN CPQWTCADLG LLKAKAIVVP IYPTSTIEQA AYIVNDAEAK LIFAGDAAQY
AMACDLVAQC DSLTRVVVFD KSVELQDLQN HFYLDDLLER EIDSAADAEL EKRLNDKNLD
DLLTLIYTSG TTGDPKGVML DYRNIASMVR QHDKFLPFTP GDVSLAFLPL SHVFERGWSF
YVLCRGGHNV YLSNPMAVKE AIVQVRPHTL CVVPRFLEKV YSAVQDKVIK APELRQKMFT
WAMSVGHKQS EVGQGRHKAS LGLNLQWKLA DKLVFSKLKQ VLGGRLKFMP CGGAALDPNV
SAFFQSIDVP VLCGYGMTET TATTTCNTLG NRVPGSNGQV IPEAEIKLGK DNEILVRGDT
VMRGYFNRPE ETAEAFEDGW LKTGDAGRID ENGNLFITDR IKELMKTSNG KYIAPQRVEG
KVGCCPFIEQ VAIVADARNY VTALIVPAFE SLEAWAKEKG VHYESQLDLL RHTHVVEHFE
QRLKTLQSEL AGFEKIKKFT LLPDAFSMEA GLITPTMKLR RKVIYNKYAR EIDKMYSR
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