| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4170 |
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| Symbol | |
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| ID | 5664554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5062857 |
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| End bp | 5063561 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238834 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_001504015 |
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| Protein GI | 157963981 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGC CAAAGTTTGA AGAGATTAAG CAATATATTT TAGCGCAAAT TGAGTCTGGC
GAATGGGCGG AAGATAGCCG CGTACCGTCT GAAAATCAGT TGGCGGAACT ATTTAATTGT
AGCCGTATGA CGGCGCGTCG AGCGTTAACT GAGTTAACCG AATCGGGCGT TTTAGAGCGT
TCACAAGGCT TAGGTACCTT CGTTGCTGGC TTAAAATCGC AGTCTTCAAT GATGGCGATC
CGTAATATTG CCGATGAGAT AAAAGACCGT GGCCATGGTT ATAGTGTGCA ACAAGTGTTG
CTCACGCAAA CGGTAGCAAC TGGCGCGATT GCGATTGCGC TTGGGCTGGA AGAAGGCAGT
ACGGTTTACC AGTCGGTATT AGTACATTGC GAGCAGGGTA CGCCGCTGCA GCTAGAAGAT
CGCTTCGTTA ATCCTAAACT GGTGCCTGAG TATTTATCCC AAGATTTTAC TAAACAAACT
CCCCATGAAT ATTTATCGAT GGTGGCACCG CTTACCGAAG CTAAGCACAC CATCGAAGCC
AAAATGGCCG ATGTGACGCA GTTAGCGCTA CTTGAAATCG CCGCCACTGA GCCCTGTTTA
CAGATCACTC GCCGCACTTG GTCACGCCAA GGTGTGGTGA GTTTTGCACG TTTAGTGCAC
CCAGGAAGTC GATTTAGACT CGGTGGCCAC CTGACTTTTA GTTAA
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| Protein sequence | MATPKFEEIK QYILAQIESG EWAEDSRVPS ENQLAELFNC SRMTARRALT ELTESGVLER
SQGLGTFVAG LKSQSSMMAI RNIADEIKDR GHGYSVQQVL LTQTVATGAI AIALGLEEGS
TVYQSVLVHC EQGTPLQLED RFVNPKLVPE YLSQDFTKQT PHEYLSMVAP LTEAKHTIEA
KMADVTQLAL LEIAATEPCL QITRRTWSRQ GVVSFARLVH PGSRFRLGGH LTFS
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