Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4168 |
Symbol | |
ID | 5664552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5059501 |
End bp | 5061033 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641238832 |
Product | histidine ammonia-lyase |
Protein accession | YP_001504013 |
Protein GI | 157963979 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATT TAGTATTAAC TCCGGGTACC TTAACCCTAG CGCAAATCCG TGAAATCAGC CGTGGCAAGG TCACTTTAGA GCTGGCCGAA AGTGCTATCG CAGATATCAA CACTAGCGCA GGCCTAGTGC AGCAAGTATT GGATGAAGGC CGCACTGTTT ACGGTATCAA CACAGGTTTT GGGTTGCTCG CTAACACTAA GATTGCCGCC GACGATCTGC AATTGTTGCA GCGCTCAATC GTACTGTCTC ATGCAGCGGG TACCGGCCAA TATATGCAAG ACGCCACCGT GCGTTTGATG ATGGTATTGA AGATCAACTC CCTAAGCCGT GGTTTCTCGG GCATTCGTTT AGAGGTGATC AACTTCCTTA TCGCCTTGGT TAACGCGGGT GTTTATCCAT GTGTACCAGA GAAAGGCTCT GTAGGGGCTT CGGGTGACCT CGCGCCGCTA TCACACATGT GTTTGCCGCT GCTTGGCGAA GGCGAGATGA GCTATCAAGG TCAGCTCATC AGCGCGGCTG AGGGCCTCGA AATTGCAGGC CTTAAGCCTA TCGAATTGGC CGCGAAAGAA GGTCTAGCGC TACTTAACGG CACGCAAGCG TCAACGGCTT TAGCCCTTGA AGGCCTATTT AACGCAGAAG ATCTGTTTGC CGCAAGCTCG GTAATCGGTG CCATGAGCGT TGAAGCGGCC ATGGGCAGTC GTAGCCCGTT TGACCCACGT ATTCACGCGG CTCGCGGGCA AAAAGGTCAA ATCGATTCGG CAGCGGTGTT CCGTCATTTA CTGGGTGGTG AGTCTGAGAT TAGCCTAGAT CACGTCAACT GTGAAAAGGT GCAAGATCCA TATTCACTGC GCTGTCAGCC ACAGGTGCTC GGCGCATGTT TGACTCAAAT TCGTCATGCG GCCGAAGTGC TAGGCACAGA AGCAAACGGC GTTACCGATA ATCCATTAGT GTTCCAAGAC ACGGGCGACA TTATCTCGGG CGGTAACTTT CACGCCGAAC CTGTTGCCAT GGCGGCTGAT AACTTGGCGA TTGCCATTGC AGAATTGGGC TCGATTGCAG AACGTCGTAT TGCGCTGCTT ATCGACTCTA ACCTGTCTAA GCTACCGCCA TTCTTGGTGG AAAACGGCGG GGTAAACTCA GGCTTTATGA TTGCCCAGGT AACAGCGGCG GCATTGGCCT CTGAGAACAA GACCTACGCC CACCCAGCCT CGGTAGATAG TTTGCCAACA TCGGCTAACC AAGAAGATCA CGTGTCTATG GCGACCTTCG CGGCGCGTCG TTTACGCGAT ATGTCTGAAA ACACCCGTGG GGTTTTAGCG GTTGAGCTAT TGGCTGCGGC GCAGGGGTTA GATTTCCGTG CGCCACTACA ACCTAGCAAG GCTGTGGCAC AGGCCAAAGG CGAGTTACGT GAGCTAGTGA GTTACTACGA TAAGGACCGT TTCTTCGGCC CAGATATCGA AGCGGCGACT GACCTACTGC TAACGGCAAG CTATAACGCT TACCTGCCAG CAGAGATCTT GCCAAGCCTA TAG
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Protein sequence | MSHLVLTPGT LTLAQIREIS RGKVTLELAE SAIADINTSA GLVQQVLDEG RTVYGINTGF GLLANTKIAA DDLQLLQRSI VLSHAAGTGQ YMQDATVRLM MVLKINSLSR GFSGIRLEVI NFLIALVNAG VYPCVPEKGS VGASGDLAPL SHMCLPLLGE GEMSYQGQLI SAAEGLEIAG LKPIELAAKE GLALLNGTQA STALALEGLF NAEDLFAASS VIGAMSVEAA MGSRSPFDPR IHAARGQKGQ IDSAAVFRHL LGGESEISLD HVNCEKVQDP YSLRCQPQVL GACLTQIRHA AEVLGTEANG VTDNPLVFQD TGDIISGGNF HAEPVAMAAD NLAIAIAELG SIAERRIALL IDSNLSKLPP FLVENGGVNS GFMIAQVTAA ALASENKTYA HPASVDSLPT SANQEDHVSM ATFAARRLRD MSENTRGVLA VELLAAAQGL DFRAPLQPSK AVAQAKGELR ELVSYYDKDR FFGPDIEAAT DLLLTASYNA YLPAEILPSL
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