| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4166 |
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| Symbol | |
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| ID | 5664550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 5057672 |
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| End bp | 5058058 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238830 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_001504011 |
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| Protein GI | 157963977 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAAG CACTTAACAC TGAATCAGCA CCAGCAGCAA TCGGCCCATA TGTTCAGGGT
GTTGACCTTG GTAGCATGAT CTTTACCTCT GGCCAGCTAC CTATCGATCC TGCTACAGGT
GAGATGTCTG CCGATGTTGC TGAGCAGGCG CTACAGTCAC TGAAAAACGT ACAGGCTATC
GTAGAGTCTG CGGGTCTAAC TATGGCTAAC GTGTTTAAGA TGACAGTATT CGTCAAAGAT
CTAAACAGCT TCCCAATCGT TAACGAAGTT TACCAAAACT TCTTCGACAA CTTAGGCGCT
GCTTACCCTG CACGTTCTTG TGTTGAAGTT GCACGTCTTC CAAAAGATGC GCTAATCGAG
ATCGAAGCGA TTGCAGTAAG AAGCTAA
|
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| Protein sequence | MTKALNTESA PAAIGPYVQG VDLGSMIFTS GQLPIDPATG EMSADVAEQA LQSLKNVQAI
VESAGLTMAN VFKMTVFVKD LNSFPIVNEV YQNFFDNLGA AYPARSCVEV ARLPKDALIE
IEAIAVRS
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