Gene Spea_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4157 
Symbol 
ID5664541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp5048487 
End bp5049113 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID641238821 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001504002 
Protein GI157963968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCG ATACCTGGTT ACTCTACCTA TTCGCCATCC TATTGATTGC AGTGTCTCCC 
GGCACTATGG CTGTACTGTC TATGGGCCAC GGTATTCACT ACGGTAAGAG CCGCAGCATT 
GCGACGGCAT TCGGTAGTGT AAGCTCGGCG CTGATCCTTA TGATGGCCTC AGCTGCAGGC 
CTAGGTGCTT TGCTAAGTGC CACCGAGTAT GGCTTTACTG TATTAAAGTG GTGTGGCGCA 
GCTTACCTGC TGTTTCTTGG CATTAAGTTA TTGCTTACTA GAGGTGATGG CAAAGGGCTG 
GAACTCAAAA CCACCCAAGG TAAAGGCACA CCAAAACAGC TATTCAAGCA GGCCTTTCTG 
GTCGGCATTA GTAATCCTAA AGATCTACTG TTTTTCGCCG CTCTATTCCC TCAGTTTATT 
GATATCAGTG CACCGCAAGG GCCGCAGCTT GCTATCCTCG CCACAACTTG GGCCGTGGTC 
GATTTTAGCT TCGTGATGAT CTACGCCAGC ATGGCCAATG TGCTTGCGCC AACATTGAAG 
TCGAGCAATA GACTGCATTG GTTCGATAGA ACCAGCGGTG GGGTATTTGT GGCTCTGGCA 
GCGATTTTAG TCAGCCGCGA AAACTAG
 
Protein sequence
MSFDTWLLYL FAILLIAVSP GTMAVLSMGH GIHYGKSRSI ATAFGSVSSA LILMMASAAG 
LGALLSATEY GFTVLKWCGA AYLLFLGIKL LLTRGDGKGL ELKTTQGKGT PKQLFKQAFL 
VGISNPKDLL FFAALFPQFI DISAPQGPQL AILATTWAVV DFSFVMIYAS MANVLAPTLK 
SSNRLHWFDR TSGGVFVALA AILVSREN