| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4146 |
|---|
| Symbol | |
|---|
| ID | 5664530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5035780 |
|---|
| End bp | 5036922 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641238810 |
|---|
| Product | putative SAM-dependent methyltransferase |
|---|
| Protein accession | YP_001503991 |
|---|
| Protein GI | 157963957 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATA AAACTAAATC TACCACTCAA GAGCGCAAGG CTGGCAAGTC TTCGGCACCT
CAACGACAAG TCGTTTCAAA ATCGAGTTTA CAGAAAAAGG TGAGCAAGCC TACTGCGACA
GCCAAGCTCC AAAAGAGTAA GGCGCTGCAC CCACGAAATG CCCACAACAA TGGCTATGAT
TTTGCCGCGT TGGTGACGGC ATTTCCGAAA CTTAAGGCTT TTGTGAAGCC TAACCCCTAT
GGCAATTTGT CGATAGACTT CGCCGATCCT GTAGCGGTTA AAATGCTAAA TGCGGCGTTG
CTAAAGTTTC ACTATGGCGT TGGCCATTGG GATATTCCCG ATGGCTTTCT ATGTCCGCCT
ATCCCTGGAC GGGCCGACTA TATCCATCAT GTGGCCGATC TGCTGGCGGT TAAAAAGTCG
AGTAAGAAGC GCATTCCTAA AGGCCCGAAA GTTCGAGTAT TAGATATCGG TACCGGAGCG
AATGTTATCT ATCCGCTACT AGGTATTCAA TCCTATGGTT GGGACTTTGT TGGCAGCGAT
GTCGACCCGC TCTCGATTGC TAATGCACAG CAGATTTTTG CCGGCAATTC CGATATTGCT
AATAAGTTTA GCTCTAGGCT GCAAGCTGAC TCTAAACACG TATTTCATGG GGTAATTGAG
GCAAATGAGC GCTTCGACCT GACCCTATGC AACCCACCAT TTCATGCTTC CTTAGCCGAG
GCAAGTGAGG GCACTGCGCG AAAACTTAAA AATCTTGCTG CCAATCGAGC CAAATCATCT
CAGGTTATGT CACCTCAAGT TCAGCCCTCT GGGAAAGTGA AGCCTGCCAC AGATAAAAAC
CATGGCGTGC TTAACTTTGG CGGCCAGAAA GCCGAGTTGT GGTGTGAGGG AGGCGAGTTG
CAATTTTTAC GGACTATGAT CGAAGAGAGT CATGACTTTG CAAGCCAGTG TTTATGGTTC
ACTACCTTAG TGTCTAAAAA GGAAAACCTT AACCCGGCAA AGGCCTTATT GGCCAAGATA
AAAGCTGAAG AGGTGAAAGA GATAGAGATG CACCAGGGCA ATAAAATTAC TCGAGTGTTG
GCTTGGACCT TTCTTAAACC TGAGCAGCGA GAGCTTTGGG TGCAGTATCG AGATGCCCAA
TAA
|
|---|
| Protein sequence | MSHKTKSTTQ ERKAGKSSAP QRQVVSKSSL QKKVSKPTAT AKLQKSKALH PRNAHNNGYD
FAALVTAFPK LKAFVKPNPY GNLSIDFADP VAVKMLNAAL LKFHYGVGHW DIPDGFLCPP
IPGRADYIHH VADLLAVKKS SKKRIPKGPK VRVLDIGTGA NVIYPLLGIQ SYGWDFVGSD
VDPLSIANAQ QIFAGNSDIA NKFSSRLQAD SKHVFHGVIE ANERFDLTLC NPPFHASLAE
ASEGTARKLK NLAANRAKSS QVMSPQVQPS GKVKPATDKN HGVLNFGGQK AELWCEGGEL
QFLRTMIEES HDFASQCLWF TTLVSKKENL NPAKALLAKI KAEEVKEIEM HQGNKITRVL
AWTFLKPEQR ELWVQYRDAQ
|
|---|
| |