| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4141 |
|---|
| Symbol | |
|---|
| ID | 5664525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5032081 |
|---|
| End bp | 5032731 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641238805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001503986 |
|---|
| Protein GI | 157963952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGTT TTCTATCTCG CTGGAATCTG CGTAAGCAAC AAGTTGAGGC TGAAGGCGAA
GCCAATGTGG CGGCAGAAGA AGCTGCGGCA CAAAAACTAG CTGAAGAGCA GGCGCTTGCT
GCACAACAAA AAGCTGCAAC TGAAGCAACA ACAGAGCAAG CCACACCGTC AGTTAACGAT
GATGCTGTAG CTGAAGAGCC CACAGACAAG ATATTAACGG CAGAAGATCT TCCTGACCCT
GAAAAAATTG AGGTTGGTGG CAGTTTTGCT AGTTTTATGG GCGCTAATGT CGATCCGGCC
GCTAAATCTG CAGCATTAAA AGCGCTCTGG AAGCAACCTC ACTATAGTGA GATAGATGGC
TTGCTTGAAT ATGCATTGGA TTACAGTAAT CAGCCACTAT TAACACCTGA TGTGTCGGCG
GAACTCGCTA AGAAAGTCTT CCGTCACATG GTTAAAGATG AAGACGATGT GAATGAAGAG
CAAGATGAAT TGGAAGCTGC ATCAGATGAG ATGATCGCGG CTGAAAAATC AGTTCAAAAT
GAATCTTTAA ATGATGCCGA ACCAATATCG GACATTTTGG ACGCTCATCA AGATGACTTA
CCCCAAAATG AACCAGAAAG CAGTGACGCT ACCACAAACA AAGTTGTTTA A
|
|---|
| Protein sequence | MSGFLSRWNL RKQQVEAEGE ANVAAEEAAA QKLAEEQALA AQQKAATEAT TEQATPSVND
DAVAEEPTDK ILTAEDLPDP EKIEVGGSFA SFMGANVDPA AKSAALKALW KQPHYSEIDG
LLEYALDYSN QPLLTPDVSA ELAKKVFRHM VKDEDDVNEE QDELEAASDE MIAAEKSVQN
ESLNDAEPIS DILDAHQDDL PQNEPESSDA TTNKVV
|
|---|
| |