| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4137 |
|---|
| Symbol | |
|---|
| ID | 5664521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5026329 |
|---|
| End bp | 5029178 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641238801 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_001503982 |
|---|
| Protein GI | 157963948 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTAA CCCGCAAAAC AGACCAAGCT GCTACAAGCA ACAAGGCAGT CTTAGGTTTA
AACCGTCGCC AATTCCTCAA GTCCGCGAGC CTCGCGACAG GCGGTATTGC AGCGGCATCA
ATGCTAGGCG CAGGAATGAT GCGCAAGGCA GAAGCTAAAG ATATTCCCCA CGACACCCCC
ACCGAAACCA AACGTACCAT CTGTTCTCAC TGTTCTGTAG GCTGCGGCGT TTATGCTGAA
GTTCAAAACG GCGTATGGAC AGGCCAGGAA CCTGCATTTG ATCACCCATT TAACGCAGGC
GGACACTGTG CCAAAGGTGC AGCATTACGT GAACATGGAC ACGGTGAAAA GCGTCTTAAG
TATCCAATGA AGTTAGAAGG CGGTAAGTGG AAGCGTCTAT CATGGGATCA AGCGATTGAA
GAAGTTGGCC AACAAGCACT AGATATTCGT AAAGAATCGG GTCCAGACTC AGTATTCTTC
ATGGGTAGTG CAAAGTTCTC AAACGAACAA GCTTATATGT ACCGCAAATT TGCGGCAATG
TGGGGAACGA ACAACGTCGA CCACTCTGCA CGTATTTGTC ACTCTACCAC TGTAGCCGGT
GTTGCAAACA CTTGGGGCTA TGGTGCGCAA ACCAACTCGT TCAACGATAT TCGCAACGCT
AAGGCGATGA TGTTTATCGG TTCTAACCCT TGTGAAGCTC ACCCTGTTGC TATGCAACAT
ATCTTGGAAG GTAAAGAGCG CGGCGCGAAA ATTATCGTTG TCGACCCTCG TTTCACCCGA
ACTGCAGCTA AGTCTGACGA GTTCGTGCAT ATTCGTCCTG GTACGGATAT TCCTTTCATT
TATGGTCTGC TATGGCACAT CTTCGAAAAC GGCTGGGAAG ATCAAACCTT TATCGATCAG
CGTGTTTACG GCATGGAGCG TATCCGTGCA GAGGCTAAGA AGTACAACCC TGCAGAAGTT
GAAAATATTG TCGGCGCGAC TAAAGAGCAG ATGTACCGCG TAGCTAAGCT ACTCGCAGAG
ACTAAGCCGG GTACCGTTGT TTGGTGTATG GGTGGTACTC AGCACCACGT GGGTAACGCT
AACACTCGTG CCTACTGTAT CCTTCAGCTT GCCCTTGGTA ACATGGGCGT GTCAGGAGGT
GGTACTAACA TCTTCCGCGG CCACGATAAC GTACAGGGCG CAACCGACTT CGGTCTTCTG
TTCGATACCC TACCGGGTTA CTACGGTCTT AAGACGGGTT CTTGGAAGCA CTGGTGTAAT
GTGTGGGACT TAGATTATGA GTGGGTTAAG AGCCGCTTTG ATCAACAGCC ACATCTAGGC
CAAGATCCAA TGACCTCAAC AGGTATCCCA TGTTCACGTT GGCATGATGG TGTACTCGAA
GATAAGTCTA AGATTGCTCA GAAAGATAAT ATTCACATGG CATTCTTCTG GGGCCAATCG
GTTAACACTG AAACTCGTGG TCGTGAAGTG CGTGAAGCAC TGAACAAGAT GAAAACAGTA
GTGGTTGTGG ATCCATTCCC AACAATGGCT GGTGTCATGC ATGAGCGCAC CGATGGCGTG
TACTTGCTAC CGGCATGTAC TCAGTTTGAA ACCTACGGTT CAGTATCGGC TTCAAACCGT
TCACTTCAGT GGCGTACCAA GGTCATCGAA CCGCTATTCG AGTCTAAGCC TGACCATGTG
GTCATGTATA AGCTTGCCAA GAAATGGGGT ATCGAGAAAG AGTTCTGCAA ACATATCAAG
GTGAATGGTG ATGAGCCGTT GATTGAAGAT ATGACTCGCG AATTTAACAA GGGTATGTGG
ACCATTGGTT ACACAGGTCA AAGCCCTGAA CGTCTGAAGA TGCACCAAGA AAACTGGGGC
ACATTCGATA TTAAATCTCT TGAGGCACCA GGTGGTCCAG CTAAAGGTGA AACTTACGGT
TTACCTTGGC CATGTTGGGG TACGCCTGAG ATGAAGCACC CAGGTTCACA GATCTTGTAT
CGCACAGGTC GTGAAGTTAA AAACGGTGGC GGTAACTTCC GTGCTCGTTA TGGTGTTGAG
CATAATGGCG TGAACATCTT AGCTGAAGGC TCTTACTCTA AGGGCAGTGA AATTAAAGAT
GGTTATCCTG AGTTTACCGA CAAAATGCTT AAGCAACTTG GCTGGTGGGA CGACCTAACT
GCTGAAGAGA AAGTACATGC AGAAGGCAAG AACTGGAAGA CAGATATCTC TGGTGGTATT
CAGCGTGTAG CCATTAAGCA TGGCTGTATT CCTTACGGTA ATGCGAAAGC GCGTTGTATT
GTTTGGAACT TCCCAGATGA TATTCCTCTG CACCGTGAGC CACTTTATAC GCCACGTCGT
GACTTGGTTG CTAAGTACCC AACATACGAA GACCGTATGG TTGCTCGTCT TCCTACCCTG
TATAAGTCGA TTCAGGAGCA GGATTTCAGT AAAGGTTTCC CATTAATCAT CACAACTGGC
CGTTTGGTTG AGTACGAAGG TGGTGGTGAA GAAACACGTT CTAACCCATG GCTTGCAGAA
CTTCAGCAAG AGATGTTTAT CGAGATCAAT CCAGCAGATG CTGCCGATCG TGGTATTCGT
GATGGTGATG ATGTGTTCGT ACATAGTCCA GAGGGTGCGA AAATCACCGT TAAGGCTATG
GTCATTCCAC GAGTTGTGCC AGGCGAATGT TTCATGCCAT ATCACTTTGC GGGTGTATTC
GAAGGCAAGA GCCTAGAGAA GAACTACCCA GAAGGTACGG TTCCTTACGT AATTGGCGAA
GCTGCCAACA CAGTAATGAC CTATGGTTAT GATGTTGTGA CTCAGATGCA AGAGACGAAA
GTGAGCTTGT GTCAGGTCAG CAAAGCCTAA
|
|---|
| Protein sequence | MRLTRKTDQA ATSNKAVLGL NRRQFLKSAS LATGGIAAAS MLGAGMMRKA EAKDIPHDTP
TETKRTICSH CSVGCGVYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGEKRLK
YPMKLEGGKW KRLSWDQAIE EVGQQALDIR KESGPDSVFF MGSAKFSNEQ AYMYRKFAAM
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIRNA KAMMFIGSNP CEAHPVAMQH
ILEGKERGAK IIVVDPRFTR TAAKSDEFVH IRPGTDIPFI YGLLWHIFEN GWEDQTFIDQ
RVYGMERIRA EAKKYNPAEV ENIVGATKEQ MYRVAKLLAE TKPGTVVWCM GGTQHHVGNA
NTRAYCILQL ALGNMGVSGG GTNIFRGHDN VQGATDFGLL FDTLPGYYGL KTGSWKHWCN
VWDLDYEWVK SRFDQQPHLG QDPMTSTGIP CSRWHDGVLE DKSKIAQKDN IHMAFFWGQS
VNTETRGREV REALNKMKTV VVVDPFPTMA GVMHERTDGV YLLPACTQFE TYGSVSASNR
SLQWRTKVIE PLFESKPDHV VMYKLAKKWG IEKEFCKHIK VNGDEPLIED MTREFNKGMW
TIGYTGQSPE RLKMHQENWG TFDIKSLEAP GGPAKGETYG LPWPCWGTPE MKHPGSQILY
RTGREVKNGG GNFRARYGVE HNGVNILAEG SYSKGSEIKD GYPEFTDKML KQLGWWDDLT
AEEKVHAEGK NWKTDISGGI QRVAIKHGCI PYGNAKARCI VWNFPDDIPL HREPLYTPRR
DLVAKYPTYE DRMVARLPTL YKSIQEQDFS KGFPLIITTG RLVEYEGGGE ETRSNPWLAE
LQQEMFIEIN PADAADRGIR DGDDVFVHSP EGAKITVKAM VIPRVVPGEC FMPYHFAGVF
EGKSLEKNYP EGTVPYVIGE AANTVMTYGY DVVTQMQETK VSLCQVSKA
|
|---|
| |