| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4132 |
|---|
| Symbol | |
|---|
| ID | 5664516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5020109 |
|---|
| End bp | 5020678 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641238796 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001503977 |
|---|
| Protein GI | 157963943 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAA TGAAATTTTT ATGTGATACC AAGCGCTGCA TCGAGTGTAA CGGTTGTGTC
ACAGCATGTA AGAACGAAAA CGACTCTGCT CTAGAGTGGG GAATTCAACG TCGTCGCGTA
GTGACTATCA ATGACGGTGT TAAAGGCGAA GCATCAATCT CAGTAGCATG TATGCACTGT
AGTGATGCAC CTTGTATGGC AGTTTGCCCA GCAAACTGTT TCTACAAGAC AGAAGATGGC
ATCGTATTGC ACGACAAAGA TACCTGTATC GGTTGTGGTT ACTGCCTATA CGCTTGCCCA
TTTGGCGCGC CACAGTTCCC TAAATCAGGT GCTTTTGGTG CTCGCGGTAA GATGGATAAG
TGTACTTTCT GTGCCGGCGG CCCAGAAGAG AACTTCTCTG AAGCAGAGCG TCAGAAGTAC
GGTGCAAACC GTATCGCTGA AGGTAAGCTA CCTATGTGTG CTGAGTTGTG TGCAACTAAG
TCATTACTTG CGGGTGACGC AGAAGTTGTT TCTGCTATCT TCCGTGAGCG TGTTGCATAC
CGTGGTTCTA ACAAAAATGT TTGGGGTTAA
|
|---|
| Protein sequence | MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGVKGE ASISVACMHC
SDAPCMAVCP ANCFYKTEDG IVLHDKDTCI GCGYCLYACP FGAPQFPKSG AFGARGKMDK
CTFCAGGPEE NFSEAERQKY GANRIAEGKL PMCAELCATK SLLAGDAEVV SAIFRERVAY
RGSNKNVWG
|
|---|
| |