| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4110 |
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| Symbol | |
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| ID | 5664494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4997234 |
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| End bp | 4997911 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238774 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001503955 |
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| Protein GI | 157963921 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAC TCATGGTTGA AGATGACGCG ACTACCATCG AATATGTCGT AAAGGGATTT
GTTGAGCAAG GGCACAATAT AGAAACTGCG ACAGACGGCC ATCAAGGTTT GTTGCTTGCA
ACCAGCATGA AGTACGACTT AATCATTTTA GATCGTATGT TGCCACAGCT AGATGGCTTG
AAGTTGTTAG CGGCGCTACG CGCTACTGGC AGTCAAACGC CAGTATTGAT CTTATCTGCG
TTAAGCCATG TCGATGAGCG AGTAAAAGGA CTACGTGCGG GTGGTGATGA CTACATGACC
AAGCCTTTCG CCTTCTCTGA GCTGTTGGTT CGTGCCGAGA AGTTGATGCA GCGTGGTGAA
TCACAGCCAG CGGTTACCGA CCTTAATGTG GGTCCGTTAA CTATAGAGTT GTTGACTCGT
AAAGTGACTC TCGATGGGCA AGAAATCTTA CTGCAGCCAA AAGAGTTTCA GCTACTTAAA
TACCTGATGG AACATGTTAA TCAGGTAATT AGTCGCACCC TGCTTTTTGA AGCTGTGTGG
GATTATCACT TCGATCCTCG TACCAATGTC ATCGATGTGC ATATCGCCAA ACTGAGACGT
AAGTTTGAAG AGCTAGGCCA CGGTGAATTA ATCGAAACTG TTCGAGGTGC TGGGTATCGG
TTACGCCAAG GGCATTAA
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| Protein sequence | MKILMVEDDA TTIEYVVKGF VEQGHNIETA TDGHQGLLLA TSMKYDLIIL DRMLPQLDGL
KLLAALRATG SQTPVLILSA LSHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGE
SQPAVTDLNV GPLTIELLTR KVTLDGQEIL LQPKEFQLLK YLMEHVNQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQGH
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