Gene Spea_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4106 
Symbol 
ID5664490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4993008 
End bp4994507 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content49% 
IMG OID641238770 
Producthypothetical protein 
Protein accessionYP_001503951 
Protein GI157963917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGT TTATCCAGTT TCATACTGTT AGATTCTTAT CGATTTTAGC CTTAATCTTC 
TCAGGGGCCA GTATTGCTGC GCCTTGGGTC GATACCTCTG ACATCTATTT GAGAGCCGAT
ATTCAGGCAC TTGCCGATGC TGGCGTTATT ACCGTCCCGG TGAATACCTA TCCGCTAATG
TGGTCGGGAA TTGGTGGCGA CTTGGCCAAG GTTGAGCCTT CGACCTTGAC TCCTGGATTG
GTCGAGGCTT TTTCGCGAGT CAATTATTAC TATCGCAATG CGGTCGATAA CCGTGGCAAC
ATCAGCCTAA AAATGGCTGC AGCTAGTGAC CCGGCGCGTT TTCAGCACTT TGGTTCAGAC
TATCGCGAGC AAGGCGAGGC AACGGCCTCT TACGAGTATT TAGGTGAGCG TTTTGCCTAC
AAGGTTTCAG CATCGGCGAA TTATGATCCT GCAGATGATG AAGAGTTTCG TTTCGATGAT
TCTTACCTTG CCATGGCGTT AGGCAACTGG ATGTTCACCT TTGGCGCCGT CGAGCAGTGG
TGGGGACCGG GGTTTGACTC AGCGCTACAC AAGTCGAATA ACGCCAGACC CATGCCGTCA
CTCATGCTGA GCCGTAATAA TGCTCAGGCA TTTGAGACCC CTTGGCTTTC TTGGATGGGA
CCTTGGACAC TTACCGCAGG TGTTAGCATG TTCGAGGAAG ATCGATATGC TCCCAATACG
CTGCTGTGGA ACGTTAGAGG TTCGATTCGT CCATTTAGAC AGCTAGAGTT AGGCTTATCG
TGGACTACGC AATTTTGTGG CGATGGCCAA GAATGTACTT GGGAAAGTGC GTTTAAGTCG
ATCACAGGTC AGCGAGACTG CCGCGCCGAT AACGTCGATG AAGTAGGTTG TTCTAATTAC
GGCAACCAGA TGGCGGGATA TGACATCCGC TTCAGCGATA CTTGGTACAA CGTGCCGTTC
GGTGTGTACT ACGAAAGAAC TTGTGAAGAT GCTAAGAGTT CGGCACCTTG GGATATCGTC
GATTGCTCAA AGCTATTTGG TGCCGATACT CGTTTTAACT TAGATGGTCA GCAGTATAAG
GTGTTCCTCG AGTACACAGA TACCATGGTG GCTTGTGGTG AAGACCAAAA CGCCTTCAAC
TGTTTCTACG AGCACTCAAC TTACAAGAGT GGTTCACGTT ATTATGACCG CGCGTTAGGC
AGCACCTATG ATAGCGATGC CAATGTGTAT GTTTTAGGTT TGATTGGCCA GTTCGCCAAT
AGCAGAGGCT TTACTTCGCT GCTGCGCTAC GCCCAACTGA ATAAAGATGG TAAGAGCCCT
AGTCACGGCT GGGCACCGCA ACCTCTTAAA GAAGACCTGT TGATGCTAGA ACTCAGCTAT
CGTATGCCAT TTTGGTACGG CATGATGAGC GTTGGTGGCA CAGTGTCTCA GTCAGAGTTT
GAAGTGCAAG AAAATGACAC CAATGCCACA GTATTTGGCA CTTATGAATA CAAGTTTTAA
 
Protein sequence
MLKFIQFHTV RFLSILALIF SGASIAAPWV DTSDIYLRAD IQALADAGVI TVPVNTYPLM 
WSGIGGDLAK VEPSTLTPGL VEAFSRVNYY YRNAVDNRGN ISLKMAAASD PARFQHFGSD
YREQGEATAS YEYLGERFAY KVSASANYDP ADDEEFRFDD SYLAMALGNW MFTFGAVEQW
WGPGFDSALH KSNNARPMPS LMLSRNNAQA FETPWLSWMG PWTLTAGVSM FEEDRYAPNT
LLWNVRGSIR PFRQLELGLS WTTQFCGDGQ ECTWESAFKS ITGQRDCRAD NVDEVGCSNY
GNQMAGYDIR FSDTWYNVPF GVYYERTCED AKSSAPWDIV DCSKLFGADT RFNLDGQQYK
VFLEYTDTMV ACGEDQNAFN CFYEHSTYKS GSRYYDRALG STYDSDANVY VLGLIGQFAN
SRGFTSLLRY AQLNKDGKSP SHGWAPQPLK EDLLMLELSY RMPFWYGMMS VGGTVSQSEF
EVQENDTNAT VFGTYEYKF