Gene Spea_4101 details

Gene Information

• Locus tag: Spea_4101
• ID: 5664485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4986700
• End bp: 4988730
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641238765
• Product: Ig domain-containing protein
• Protein accession: YP_001503946
• Protein GI: 157963912

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCCCT TCAGTAGAAT ATTCGCTCTC GTCTTTTTAA GTTTCATATT AGCAGCTTGT 
GGTGGAGATG ACGGTGATGG TCCGGTTTGT CCTTCAAATG TCCCCTGTGA ATTAATCAAC 
GATAACGCTG CGCCTACAGC GGCTGTGATT TACGAGGTTT CGTTAACCAT TACCGATGCC 
GAGGGCAATG AGATCTCATC TATCTCTTCG GTCAATCCAG GTAAGCTGGT TGCTAATGTT 
AGCGGCATCA CTGAACCGAC TATCGTTAGC TTTGCTAGCA CGCTAGGGGA GCTCCCTATT 
ACCACGGCGG TTACCGACAG TGATGGCAAT GCCAGTGTGG TTATCTACGC GGGTAACGAG 
TTAGGAGCGA GTTCGGTAAC TGCGAGCCTT GTTTCTGGTG AACAAGATAT GGCGATCTTA 
GTCATTGGTG CCACCAACTT AGAGATGGGT AGCGGTGACC CACTGCAGTC CGGTGTCGCA 
GAGGTGAGTA CCGCTTCGCT ATCGGCGGGC GGAACTGCAA GCGTGTCGGT GATGATTGTC 
GATGAACAAG GGCAGCCTTT CAATGAAGCT ATAGATGTTT TCTTTAGCTC TGGTTGTTCG 
TTGCTGTCTA CGCCATTAGC TGAGGTGAGT TCGCCGGTAA TGTTAGTAAA GGGGGTCGCG 
ACCAGTACTT ATCTTGCAAA GGGCTGCGTT GGCGACGATA CCATTAATAT CAGTGCCAAT 
GCCGGTGGCA TCAATCTATT TGCCACTGGA AGTATTAATG TTCTAGCCGC AGAGAAGGGC 
AGTATTGTGT TTGTATCGGC GACACCGAGT GATATTGGCA TTTTGGGCTC GGGCAGGGAT 
GAGTCATCCA CAGTGCTGTT TAAGGTGCTA GATACCAACG GTAATCCTGT CAGTAATGCT 
GCGGTGAGTT TTGCTTTGAA TACCCAAGTT GGTGGGCTAA AAATTCAACC GACTACGGCA 
AGCACCAATG GCAGCGGTAT AGTCCAAACC ATAGTGACAT CAGGTACAGT GGCCACACCT 
GTAAGGGTAA CGGCAAGCAT CGACAACAGT AATCCACTCC TATCGAGTCA GTCGAGCACC 
TTAGTGGTAT CAACCGGGAT CCCAGATCAA GATAGCTTTT CATTGTCTGC AGAGATATTA 
AATGCCGAGG GCTGGAGCTA TGACGGCGAG CAGGTCAAGA TCACTGCTAG GCTAGCGGAT 
GCGTTTAATA ATCTCGCACC AGACGGAACT GCTGTGGCCT TTGTCACCGA AGGTGGTGCT 
ATCGGTTCTT CCTGTTTCAC GGCTAATGGC GAGTGTAGCG TGACTTGGTC TAGCCAGAAC 
CCACGCCCGC TAAATGGTCG GGCAACCATT ACCGCCACAG CTATTGGTGA AGAGTCTTTC 
CCTGACTCTA ATGGTAATGG TCGTTTCGAT GCCGCTGAGA TGGCCGCCTT TTTAGCAACG 
GATGTAGCAG GGCGCTCCAA TGATATGGAT GAAGCCTTTA ACGATTACAA CGAAGATGGC 
AGCTTCAATG AAGATGGGTT AGAAGAGTTA ATAGACTTTA ATGGTGACGG TGCATTTACC 
GCTAGAGATG GTATATATAA CGGTGTGTTG TGTAGCGACC CGGTACATAG TGGTTGTGCC 
GATGGCGTCT CCGATTCTAA GTCGATTAAT GTTCGAGATA GCCTAGTGCT GATCATGTCT 
GGAAGTACCG CATTTGGAAG TGACCTCACT GTTGTGGACA GCTCAAATGA TAACGGCGAC 
AGTGTCTTAG ACCTATATGG TAAAGAGACG GGACAGGTTT CATTAATCAT TAAAGATATC 
AATGGGCAAC AGATGCCTGC TGGGACTAAG GTGGAGATCT CTGCTACGGC GGGAACGGTA 
GTGAGCAAGA GCAGCTTCGT TTGGCCTTCG ACGAATGCGC CGGGAGGGCT TGGTTTTGGT 
ATCTTGGTGA AGGGTGAAGA CACCGCAAAC ACCGGAGCGC TGTTAATTGA GGTGCAAACG 
CCAAATGGTG TGGATACTTT GGTAACAACT ATCCCAATCA CCATTCATTA G 

 

Protein sequence

MVPFSRIFAL VFLSFILAAC GGDDGDGPVC PSNVPCELIN DNAAPTAAVI YEVSLTITDA 
EGNEISSISS VNPGKLVANV SGITEPTIVS FASTLGELPI TTAVTDSDGN ASVVIYAGNE 
LGASSVTASL VSGEQDMAIL VIGATNLEMG SGDPLQSGVA EVSTASLSAG GTASVSVMIV 
DEQGQPFNEA IDVFFSSGCS LLSTPLAEVS SPVMLVKGVA TSTYLAKGCV GDDTINISAN 
AGGINLFATG SINVLAAEKG SIVFVSATPS DIGILGSGRD ESSTVLFKVL DTNGNPVSNA 
AVSFALNTQV GGLKIQPTTA STNGSGIVQT IVTSGTVATP VRVTASIDNS NPLLSSQSST 
LVVSTGIPDQ DSFSLSAEIL NAEGWSYDGE QVKITARLAD AFNNLAPDGT AVAFVTEGGA 
IGSSCFTANG ECSVTWSSQN PRPLNGRATI TATAIGEESF PDSNGNGRFD AAEMAAFLAT 
DVAGRSNDMD EAFNDYNEDG SFNEDGLEEL IDFNGDGAFT ARDGIYNGVL CSDPVHSGCA 
DGVSDSKSIN VRDSLVLIMS GSTAFGSDLT VVDSSNDNGD SVLDLYGKET GQVSLIIKDI 
NGQQMPAGTK VEISATAGTV VSKSSFVWPS TNAPGGLGFG ILVKGEDTAN TGALLIEVQT 
PNGVDTLVTT IPITIH