| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4093 |
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| Symbol | |
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| ID | 5664477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4977275 |
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| End bp | 4978648 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238757 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001503938 |
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| Protein GI | 157963904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA TGAAGCCACT TCCTTCAGCT GTATCTGTAT TGATTGTCGA TGATGAACCG
GGCATGCGCA GTTTTTTGAA AAAAGCGCTA GCGAAGAAAT TTGCCTTGGT TGAAACCGCT
TCGAGTGTCG AAGATGCTGA GCAATTGCGT TCACGCTGCC ATTTTGATCT ATTAATTGTC
GATATTCGCC TACCTGGGCG CTCGGGAATT GAATGGCATG AGGCGTTAAA TGATCAAGAA
AGGCGCTCTG ACATCATCTT TATGACCGGC TACGCCGATA TGGATGTGGC AATAAAGGCA
CTACGCGCTG GTGCATCTGA TTTCATTATG AAGCCTTTCC ACCTTGAACA GATGATGAAG
GCGGTTGACC GCTGTATCGA GCGACGCTTG CTTAAGCGTG AAAACTTGAT GCTACGTCGT
GAAGTGTCTT TCAATCAATC TTCTACCATT ATTGGCCAAA GCGATGCGAT GACTGAGGTG
AAGCATGTTA TTGAACGTGT GGCGCCAACC AATGCCGTAG TCTTGATTGA GGGTGAGTCT
GGTACGGGTA AAGAGTTGGT TGCTCGTCAG TTGCATATTC TTAGTGGTCG CCAAGGACCA
TTTGTGCCAG TTAACTGTGG CGCCATCGCC CCAGAACTTT TAGAGAGCGA GCTTTTCGGT
CATTCTGCAG GTGCATTTAC AGGCGCGAAG GGTAACCGAG AAGGTCTATT TAGTTTTGCC
TCTGGTGGTA CAATCTTCCT CGATGAAATT GGCGAGATGC CGCTGAAAAT GCAAACGGCG
CTATTGCGCG TGCTTGAGCA GCGTACCATT CGTCCCGTCG GTAGCGAGAA AGAGATCAAT
ATCGATGTGC GCGTGTTGGC AGCGACTAAC CGTAAGCTAT CTGAAGAGGT TGAAGCGGGT
AACTTTAGAC GCGATCTATA TTATCGCCTC AATGTGCTCG ATATAGTGAT CCCGCCGTTG
CGTGATCGCC CAGAAGATAT CGTTGAGCTG ACTCATCACT TCACTTGCCA ATTAGCGGCA
GAGCTAGGCG TGAAAGAGGT GGTGTGGAGT CATGAAGATC TATTGAAGCT GCAACAACAC
GAATGGCCAG GTAATATTCG TGAGCTGCGA AATATGATTG AACGCTGTAT CCTATTGGGC
AAGCCGCCTG CTGAATACTG GAAAGTGCAG CCAAAGACTG AGGCTGCAGG CGAGTCAGGT
TATCCACTAC AGTGGGCGCT TAAAGATGTT GAGCGTGATC ATGTGACTCG CGTTGTTGAC
CTACATGGTG GCAATAAGTC GGCAGCAGCA AGGGATCTGG GGGTATCACG AAAGACTCTA
GATCGAAAAT ATAAAGAATG GTTCGGCGGT GAAGCCGACA AAGAAGAATC TTAA
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| Protein sequence | MNNMKPLPSA VSVLIVDDEP GMRSFLKKAL AKKFALVETA SSVEDAEQLR SRCHFDLLIV
DIRLPGRSGI EWHEALNDQE RRSDIIFMTG YADMDVAIKA LRAGASDFIM KPFHLEQMMK
AVDRCIERRL LKRENLMLRR EVSFNQSSTI IGQSDAMTEV KHVIERVAPT NAVVLIEGES
GTGKELVARQ LHILSGRQGP FVPVNCGAIA PELLESELFG HSAGAFTGAK GNREGLFSFA
SGGTIFLDEI GEMPLKMQTA LLRVLEQRTI RPVGSEKEIN IDVRVLAATN RKLSEEVEAG
NFRRDLYYRL NVLDIVIPPL RDRPEDIVEL THHFTCQLAA ELGVKEVVWS HEDLLKLQQH
EWPGNIRELR NMIERCILLG KPPAEYWKVQ PKTEAAGESG YPLQWALKDV ERDHVTRVVD
LHGGNKSAAA RDLGVSRKTL DRKYKEWFGG EADKEES
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