Gene Spea_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4092 
Symbol 
ID5664476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4975105 
End bp4977225 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content49% 
IMG OID641238756 
Producthistidine kinase 
Protein accessionYP_001503937 
Protein GI157963903 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTG TTAGTTGGCA ACAAATGCAG GCTAAGGTGC GCTATCGCAT CCTGATTTTA 
ACCCTGTTGC CCATCTTGCT CACTCTTGTG AGTTTGGTTT TTATTACCAT CTATTGGAAT
ATTAGCTACA CAGGTAAACA GCTGTTTATG AAGGTCAAAG CCGATTTGAC CGTTGCAAAC
AGCACCCTAG TGACCGTGCA AACAAACCAA GAGAACCAGC TAGAGTTGGT GATGGAGTCT
TGGCAGTTCC AGAATGATTT CAGGAAAATT GGCAACGGCG CCCAGCTCCC TCGCGACAAC
TTGCAGCTGG TACTAGAACA AGCGAAGAAA GATCTTAATT TAGATTTCTT ACGCCTAGTC
AGTGTTGCGG AGGCCGCGGC GGATCCTGAT CTGCGGCAGA TGTTGCCGCA TATCGAAGGT
TTAGCCCCTT TCTCTGGCTT GATGGTGCTT GAACCGAGTC GATTGGCTCG CATCGACCCT
GTACTCGCCG ATAGGGCCAA AGTGTCTGTA ATGAAGACCT TGCGAGCTCA AGAGCCCAGT
AAACATGAAG AGAAGCGTGG CCTGTTAAGT CGCAGCTTGC TGCCTGTTGC CGACATGAAT
GGTAATGTCG CCTGGTACTT AGATGGCGGC ATCATGCTTA ATCGCGATAC CCGCATTGTC
GACCATATTC GTGATCTGGT GTACGACAAG GGCACGCTGC CGGAGCGCTC AATCGGTACC
GTGACTATTT TCCTCGATAA TATCCGTATC AGTACCAATG TGCCGTTGCA CTTCTTTCCT
CAAGGAGGTG ATCAGCAAGG GCGTGCCTTA GGCAGCTTAG TCTCATCTGA GGTACGCGAA
AAGGTATTGA TTCAAGGGCT ACTATGGGTC GATAGAGCTT TCGTCTTTAA TGACTGGTTT
ATCTCGGCAT ACTCACCGCT GGAAGATATT AACGGTAAGC GGATCGGTAT GATCTATACC
GGATTTTCTG AGTCTCCATT TATCCATAAC TACCTGCTCA ATATTATCGA ACTGGGCACC
ATCTTGATGC TGGTGTTGCT GGTCTCTGGC TGGTTGGTAT ACCGCGGTGC CTATAGCTTG
TTACAACCTA TTGAACGCAT CCACCACGTG GTGAAAGCGG TGCAGTCTGG ACGTAATCTA
CGTATAGGTT CACTGGGTTT AGACAGCGAT AATGAGCTAT CTAATCTGGC CGAGCAGTTT
GACCGCATGT TGGATCTACT GCAGATGCGT AACAGCCAGA TCCAAGCTGC CGCTGAGCAG
CTTGAAGTCA AAGTCGAAGA ACGAACTCGC AGCCTACAAG AGAAGACAGA AGAGCTGCAG
GCTAACGTCG CTCTACTCAA TGAAACCCGA CAGCAGCTGG TGATCAACGA GAAGTTGACT
GCCCTAGGTG AGCTAACTGC GGGTATTGCC CATGAGATCA ATAACCCTAC GGCGGTGATT
CTGGGTAATA TGGAGCTGCT TAAGTATGAG CTTGGAGATA GAGCGGCCGA TGTCGAAGAA
GAGATCGAGC TGGTTATTCA GCAAGTAGGC CGTATTAGCA CCATTATTCG CAGTCTGTTG
CAATACAGCC GCCCTGGTGA GTTTAATGCA CCGCTTGAGA TGCACCAGAT CACGCCGATT
ATCGAAGAGA TGTTGGTATT GGTGCGTCAC TCTATCCAGA AACAGCAGGT GGTACTCAAT
CAAGAGCTTA ACGCTAGCTA CCCGATTCAG GTTAATCGCC CGCAGCTACT ACAGGTACTG
ATTAACCTCG TCGTTAATGC GGCTCACGCA ATGAATGGTA AGGGGCAGAT CTGGATAAGA
ACCTATGATT GGGTACAACG TGGAGAGCCT GTTGGCGTCA AGATTGAAGT TGAAGACGAA
GGTAAAGGGA TCCCAGAAGA GGAGCTCAAT CGCATTTTCG ATCCGTTTTT CACTACCCGT
AAAGACGGCA CTGGACTGGG GCTATCGCTG AGTTACGGTA TCATTAAGCG TATTGGTGGC
ACCATAGAAG TCAACTCTAC CGTAGGCAAG GGCAGTCTAT TCACCATAGG CTTATACCAC
AAGGCCATTG AAGACCAGAG TAATACCCCC TATGAAGGTT TGCAATTTTG CGGAAAACAT
TCAGACATGT CGCGAGACTA G
 
Protein sequence
MFGVSWQQMQ AKVRYRILIL TLLPILLTLV SLVFITIYWN ISYTGKQLFM KVKADLTVAN 
STLVTVQTNQ ENQLELVMES WQFQNDFRKI GNGAQLPRDN LQLVLEQAKK DLNLDFLRLV
SVAEAAADPD LRQMLPHIEG LAPFSGLMVL EPSRLARIDP VLADRAKVSV MKTLRAQEPS
KHEEKRGLLS RSLLPVADMN GNVAWYLDGG IMLNRDTRIV DHIRDLVYDK GTLPERSIGT
VTIFLDNIRI STNVPLHFFP QGGDQQGRAL GSLVSSEVRE KVLIQGLLWV DRAFVFNDWF
ISAYSPLEDI NGKRIGMIYT GFSESPFIHN YLLNIIELGT ILMLVLLVSG WLVYRGAYSL
LQPIERIHHV VKAVQSGRNL RIGSLGLDSD NELSNLAEQF DRMLDLLQMR NSQIQAAAEQ
LEVKVEERTR SLQEKTEELQ ANVALLNETR QQLVINEKLT ALGELTAGIA HEINNPTAVI
LGNMELLKYE LGDRAADVEE EIELVIQQVG RISTIIRSLL QYSRPGEFNA PLEMHQITPI
IEEMLVLVRH SIQKQQVVLN QELNASYPIQ VNRPQLLQVL INLVVNAAHA MNGKGQIWIR
TYDWVQRGEP VGVKIEVEDE GKGIPEEELN RIFDPFFTTR KDGTGLGLSL SYGIIKRIGG
TIEVNSTVGK GSLFTIGLYH KAIEDQSNTP YEGLQFCGKH SDMSRD