| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4080 |
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| Symbol | |
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| ID | 5664464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4959855 |
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| End bp | 4961033 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238744 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_001503925 |
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| Protein GI | 157963891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family
[TIGR03528] diaminopropionate ammonia-lyase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGC TGACTCAAAA TGATTTCTTT AACGGCGAGA CTTCTGAACT TTTCACTGCT
CAAGTCGCTG AACAAACTCG TCAATTCCAC CAGCAGATCG AAGCTTACCA GCCAACACCG
CTGGTCTCTT TAGAGCAGCT TGCTGCACGC TTAGGCGTTA AAGCAATTCT GGTTAAAGAC
GAATCTTACC GTTTCGGTCT AAACGCTTTT AAAGTACTGG GTGGTTCTTA CGCATTAGGT
AAGCAACTTG CTGAGCACTT AAATGTAGAT ATCAGTGAAA TTGATATGAA AACTGTTGCC
GCTAAATTAA GCGCGCCATT GGTTTTCGCT ACTGCAACTG CTGGTAACCA CGGCACAGGT
GTGGCTTGGG CTGCACGTGA AATGGGCCAA AAGGCTGTTG TTTACATGCC AAAGGGTTCA
TCTCAAGCGA GTGTGACTCG CATTCAAAAC TTAGGTGCTG AGTGTATCGT TACTGACTGT
AACTACGACG ACACCGTACG TATTGCTAAC CAAACCGCGA CTGAAAACGG TTGGATGCTA
GTACAAGATA CTGCATGGGA AGGTTACGAC AAGATCCCAA CTTGGATCTC TCAAGGCTAT
ATGACTATGG CCGTTGAAGC GCAAGAGCAA GTTGAAGCCA TGGGTCTTAA GCCAACTCAC
CTAATGCTAC AAGCAGGTGT TGGTGCAATG GCTGGCGGTC TATTAGGTTA CTTCGCTGAC
AAAGTTGGCG CGACTAACTT CAAGACTATT ATTGCTGAGC CTGCAAAAGC AGATTGTATC
TACAACTCAG GCATTAAAGG CGAAATGGTT GCAGTAACTG GCGAGTTAAA CTCTATCATG
GCAGGCCTTG CATGTGGCGA GCCTAACCCA GTCACTTGGC CTATCCTTAA GCAATGCAGC
AGCTTCTTCG CATCAGTTGA AGATGAAGTA ACCGCGACGG GGATGCGCGT TCTTGGTAAC
CCACTAGCGG GTGATACTAA AGTTGTTAGT GGTGAGTCAG GTGCACTAAC TCTAGGCCTA
CTTTACATGC TAGCAAGCCG TGAAGAGTAC AGCGAGTACC GCACGCAGCT TGGCCTAGAT
CAAGATGCCG TTATCATGCT GTTCAGCACT GAAGGCGACA CTAACCCAGA CCGTTACCGT
CAAATCGTTT GGGAAGGCAT GCACAGCACT GCTAAATAA
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| Protein sequence | MLKLTQNDFF NGETSELFTA QVAEQTRQFH QQIEAYQPTP LVSLEQLAAR LGVKAILVKD
ESYRFGLNAF KVLGGSYALG KQLAEHLNVD ISEIDMKTVA AKLSAPLVFA TATAGNHGTG
VAWAAREMGQ KAVVYMPKGS SQASVTRIQN LGAECIVTDC NYDDTVRIAN QTATENGWML
VQDTAWEGYD KIPTWISQGY MTMAVEAQEQ VEAMGLKPTH LMLQAGVGAM AGGLLGYFAD
KVGATNFKTI IAEPAKADCI YNSGIKGEMV AVTGELNSIM AGLACGEPNP VTWPILKQCS
SFFASVEDEV TATGMRVLGN PLAGDTKVVS GESGALTLGL LYMLASREEY SEYRTQLGLD
QDAVIMLFST EGDTNPDRYR QIVWEGMHST AK
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