Gene Spea_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4064 
Symbol 
ID5664448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4940533 
End bp4941105 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content44% 
IMG OID641238728 
Producthypothetical protein 
Protein accessionYP_001503909 
Protein GI157963875 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.470038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT ATTTTAGGCT GTTTTGGCTA TTTGTATGGC GAAGCCGCCA TTGTAAGAAA 
ATCGACTTTT TAGACACTAG CCGACTGGAG TATCGCGCGT TACCTAGTGA CTGCGATATC 
AACTTTCATC TAACAAATTC TCGCTATCCT GCTTTTATGG ATCTCGCGCG TACCTATATG 
ATGGCTGAGA TGGGGTTTCT GAAACGTTTC TTAAAGTTAG GTTGGATGCC TATCGTTAAT 
GCGGCCGAAT TTACCTATAT TCGTGATATC AAGCCGTTCG CCAAGTTTGA GATAGAAACT 
AAGCTGGTGG GCTGGGATGA GAAGTATTTT TATATTGAGC AGCGCTTCGT TAGCGAGCGA 
GGTTTGCACT GTATCGCCCA TGTGCGGGGA GTATTTGTTT GTAAACGTAA ACAAGTACCA 
ATTGCCACTA TGTTGGCTGA AGTCGGCTTC AATGAACCTG CACCTCAATT GCCACCCGAG 
GTGATAAAAT GGAAGAGCTT CTTACAGCTT AAAAAAGAGT GCAATCTGCC AATTCCCTCA 
AGTGAACCGA TAGAGTTTAG ATCAGCGAGC TAA
 
Protein sequence
MNLYFRLFWL FVWRSRHCKK IDFLDTSRLE YRALPSDCDI NFHLTNSRYP AFMDLARTYM 
MAEMGFLKRF LKLGWMPIVN AAEFTYIRDI KPFAKFEIET KLVGWDEKYF YIEQRFVSER 
GLHCIAHVRG VFVCKRKQVP IATMLAEVGF NEPAPQLPPE VIKWKSFLQL KKECNLPIPS 
SEPIEFRSAS