| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4061 |
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| Symbol | |
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| ID | 5664445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4937252 |
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| End bp | 4938403 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238725 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001503906 |
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| Protein GI | 157963872 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000265031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAAA TAGTGAAAAT TGCCTCTGTT TTAAGTGTGG CGTTATGGAT AACTGGCTGT
GAGCCAAAAC CTGAGCAGGG GCCACAACAA CGTGGACCTA TGGAAGTTGG CGCTATAACA
GTTACAGCCC AACCTCAATC GATTATGGTT GAACTACCAG GTCGTAGTAA GGCATATCTA
GAAGCTGAAG TACGTCCACA GGTGAGCGGT ATCATTATGA CCCGCGGCTT TACTGAAGGT
AGAGATGTTG AGCAAGGTCA GTCTTTATAC CAGATCGAAC CTTCTACTTA CGAAGCTGCA
CTAGTTAGTG CGAAAGCTGA TCTTACCAGC GCTGAAGCGG CATTGGTTTC GGCTAAAGCT
AAAGCGTTAC GCTTTGCGAA ACTAATCAAG CTGAACTCTA TTAGTCAACA AGACTTCGAT
GAAGCTGATG CGGCTTATAA AGAGGCTATG GCACGTGTAA CCGTAGCAAA AGCTGCGATT
AACACAGCGT CGATCAACCT TGAATATACT AAGGTAACAG CACCAATTTC TGGCCGTATC
GGTAAGTCTG ATGTGACACC GGGTGCACTT GTTACAGCTA ATCAAAGCCA AACATTAGCG
ACAATTCAGC AGTTAGATCC AATCAATATC GATATCGCCC AGTCGAGCGC GCAAATGTTG
CGTCTTAAGT CTCAACTTAA GCGTGGTCAA ATTGAAGCCG CTGCAAATGC GAATGTAGAG
CTAATCCTTG AAGATGGCAC TCCATATAGT CATACAGGCG TGCTGCAGTT TGCTGAAGTT
ACCGTTAATG AAAACACGGG TTCTGTGATT ATTCGTGCCG AATTCCCTAA TCCGGAAGGC
GTGTTAATGC CGGGCATGTA TGTGCGTGCT GTGCTTAATA CTGGTACCGA TCCGGCTGCG
ATTCTAGTAC CACAAAAAGC CATTACTCGT AACACCAAAG GTGAAGCGGT AGCTATGGTT
ATTGATGATG GCAAAGTGGC TGCACGTATT GTGACAACTG CTGAAGTGAT TGATAACCAA
TGGCGTATTC TTGATGGTTT GAAAGTGGGC GATCAACTAA TCGTTGAAGG TCTACAAAAA
ATTCGTCCAG GCGCCCCAGT AAAGGCGGGT CCTTTGGTCT CTGACAAGAA ACCAGAAACA
CAACAGAAAT AG
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| Protein sequence | MRQIVKIASV LSVALWITGC EPKPEQGPQQ RGPMEVGAIT VTAQPQSIMV ELPGRSKAYL
EAEVRPQVSG IIMTRGFTEG RDVEQGQSLY QIEPSTYEAA LVSAKADLTS AEAALVSAKA
KALRFAKLIK LNSISQQDFD EADAAYKEAM ARVTVAKAAI NTASINLEYT KVTAPISGRI
GKSDVTPGAL VTANQSQTLA TIQQLDPINI DIAQSSAQML RLKSQLKRGQ IEAAANANVE
LILEDGTPYS HTGVLQFAEV TVNENTGSVI IRAEFPNPEG VLMPGMYVRA VLNTGTDPAA
ILVPQKAITR NTKGEAVAMV IDDGKVAARI VTTAEVIDNQ WRILDGLKVG DQLIVEGLQK
IRPGAPVKAG PLVSDKKPET QQK
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