Gene Spea_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4059 
Symbol 
ID5664443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4933159 
End bp4933716 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID641238723 
Productphosphodiesterase 
Protein accessionYP_001503904 
Protein GI157963870 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00143502 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT TTATTGCCTC CGATCTACAC GGCTCTGTTA TAGCCACTCA AGCCATGCTG 
ACTCGCTTTG AGCAGTCTGG GGCTCAATAC CTTATTCTGC TCGGAGACAT GCTTAATCAC
GGCCCGCGTA ACGCCATCCC CGACGGCTAC AATCCCACGG CCTTAGCTGA AACGCTGAAC
CAGTATGCCG ATAAGATTAT TGCCGTTCGC GGTAACTGCG ACAGCGAAGT AGACCAAATG
CTACTGCAAT TTCCGATCAC CGCGAGCTTT GCTCAAGTAT TGATGCCACA AATGCGTTTA
TTCCTCACCC ACGGCCATAT TTATAATCCC GATAACCTGC CACCGCTACA AGCTGGTGAT
GCACTAGTCT ATGGTCATAC CCACATTGCA GTGGCTGAAT ATCGTGACGA TATTTTATTG
TTCAACCCGG GTTCAACCAC CATTCCACGT AATGGTGCTC GAGCTTCTTA CGGCTTAATC
ACTGACACAG AATGTCAGGT ACGCGCCATA GACAACGATG AGCTACTACT CAGCTGTCCG
ATACGTCATA CAAGATAG
 
Protein sequence
MKLFIASDLH GSVIATQAML TRFEQSGAQY LILLGDMLNH GPRNAIPDGY NPTALAETLN 
QYADKIIAVR GNCDSEVDQM LLQFPITASF AQVLMPQMRL FLTHGHIYNP DNLPPLQAGD
ALVYGHTHIA VAEYRDDILL FNPGSTTIPR NGARASYGLI TDTECQVRAI DNDELLLSCP
IRHTR